A prediction model for differential gene expression (DE) based on genome-wide regulatory interactions
☆25Mar 9, 2023Updated 2 years ago
Alternatives and similar repositories for DEcode
Users that are interested in DEcode are comparing it to the libraries listed below
Sorting:
- ☆23Jul 9, 2025Updated 7 months ago
- ☆14Sep 1, 2024Updated last year
- An R package to implement Differential Gene Set Enrichment Analysis (DGSEA): A statistical approach to quantify the relative enrichment o…☆14Apr 12, 2023Updated 2 years ago
- Collection of useful methods for single cell analysis☆15Aug 22, 2024Updated last year
- A comprehensive tool to infer TF-centred, spatial gene regulatory networks for the spatially resolved transcriptomic data.☆19Apr 27, 2025Updated 10 months ago
- Learning meaningful representations of genes☆21Jul 7, 2025Updated 7 months ago
- ☆20Oct 26, 2023Updated 2 years ago
- A library for the deconvolution of bulk cell samples using single-cell RNA expression data.☆23Nov 3, 2021Updated 4 years ago
- ☆21Feb 20, 2026Updated last week
- GTEx analysis scripts☆20Mar 14, 2017Updated 8 years ago
- An analytics package for single cell data☆22May 18, 2022Updated 3 years ago
- Single Cell Genomics for Enhancing Cell Composition Inference from Bulk Genomics Data☆20Jul 13, 2021Updated 4 years ago
- An Interpretable Self-Attention Network with block-attention and attention-attribution.☆12Sep 22, 2023Updated 2 years ago
- ☆25Feb 18, 2021Updated 5 years ago
- An interpretable deep-learning architecture of capsule networks for identifying cellular-type gene expression programs from single-cell R…☆26Dec 3, 2020Updated 5 years ago
- Scripts for building computational models of gene regulation with tensorflow☆27May 3, 2023Updated 2 years ago
- Reproducing all analyses and figures for the ASAP-seq paper☆29Jun 11, 2021Updated 4 years ago
- ☆36Feb 20, 2026Updated last week
- rnalib: a python-based transcriptomics library☆11Jan 23, 2026Updated last month
- R Package for Bootstrap Unit Root Tests☆10May 5, 2025Updated 9 months ago
- ☆11Feb 20, 2026Updated last week
- ☆10Sep 29, 2023Updated 2 years ago
- 8x8x8 LED Cube, AtMega32☆26Apr 3, 2016Updated 9 years ago
- A fast and accurate RNA secondary structure, end-to-end approach prediction method.☆12Jan 2, 2025Updated last year
- Simultaneous deep generative modeling and clustering of single cell genomic data☆32Nov 14, 2022Updated 3 years ago
- Reproduce analyses in Harmony Manuscript☆11Feb 21, 2020Updated 6 years ago
- Source codes for RobotLinking Arduino Learning Kit☆11Jan 4, 2018Updated 8 years ago
- Chromosome Scale Assembler: A high-throughput chromosome scale genome assembly pipeline for vertebrate genomes☆10Oct 16, 2024Updated last year
- An R package for adjusting Stochastic Block Models from networks data sampled under various missing data conditions☆12Mar 13, 2025Updated 11 months ago
- A Shiny-based framework to analyze and visualize interactively genomic data☆11May 11, 2023Updated 2 years ago
- Official PyTorch Implementation of Federated Learning with Positive and Unlabeled Data☆10Aug 12, 2022Updated 3 years ago
- Spatial Seemingly Unrelated Regressions☆11Apr 22, 2022Updated 3 years ago
- ☆14Dec 18, 2024Updated last year
- Implementation of multiplex Leiden for analysis of spatial omics data☆17Feb 2, 2026Updated 3 weeks ago
- Trainable representation analysis study repository☆44Apr 5, 2022Updated 3 years ago
- Proteome-Wide Association Study☆50Apr 4, 2021Updated 4 years ago
- RNA-binding protein motif analysis☆10Sep 29, 2025Updated 5 months ago
- Build your Ground Station Software with Telestion.☆12Nov 7, 2025Updated 3 months ago
- ☆11Aug 21, 2024Updated last year