rajewsky-lab / find_circ2Links
Find circRNAs in RNA-seq data.
☆14Updated 8 years ago
Alternatives and similar repositories for find_circ2
Users that are interested in find_circ2 are comparing it to the libraries listed below
Sorting:
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆41Updated 4 years ago
- tools to find circRNAs in RNA-seq data☆43Updated 7 years ago
- ☆34Updated 5 years ago
- A Perl/R pipeline for plotting metagenes☆37Updated 3 years ago
- ATAC-seq processing pipeline☆33Updated 3 years ago
- Integrative analysis pipeline for pooled CRISPR functional genetic screens☆30Updated last year
- A tool for accurately detecting actively translating ORFs from Ribo-seq data☆37Updated 4 months ago
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆39Updated 3 years ago
- CLIP-seq Analysis of Multi-mapped reads☆30Updated 3 years ago
- A statistical tool to detect differential alternative splicing events using single-cell RNA-seq☆22Updated last year
- Demultiplexes a fastq.☆44Updated 4 years ago
- MAnorm2 for Normalizing and Comparing ChIP-seq Samples☆33Updated 2 years ago
- ☆20Updated 5 years ago
- a toolset for mining multi-dimensional features of the translatome with ribosome profiling data☆18Updated 4 months ago
- optimization of ribosome P-site positioning in ribosome profiling data☆52Updated 3 months ago
- A modular, containerized pipeline for ATAC-seq data processing☆58Updated 2 weeks ago
- Estimate locus specific human LINE-1 expression.☆35Updated 2 years ago
- Identifying genome-wide translated open reading frames using ribosome profiling☆23Updated 2 years ago
- perl cworld module and collection of utility/analysis scripts for C data (3C, 4C, 5C, Hi-C)☆66Updated 5 years ago
- DaPars(Dynamic analysis of Alternative PolyAdenylation from RNA-seq)☆48Updated 2 years ago
- Tutorial Website☆59Updated 4 years ago
- Epimap processing and analysis code repository☆33Updated 2 years ago
- Dynamics analysis of Alternative PolyAdenylation from RNA-seq☆59Updated last year
- IDR☆31Updated 2 years ago
- direct comparison of circular and linear RNA expression☆23Updated 4 years ago
- SEASTAR - Systematic Evaluation of Alternative transcription STArt site in RNA☆13Updated 7 years ago
- Detection of Circular RNA and Fusions from RNA-Seq☆32Updated 6 years ago
- Updated DANPOS2 to work with python3☆21Updated last year
- A computational workflow for exitron splicing identification☆12Updated 9 months ago
- Scripts to import your FeatureCounts output into DEXSeq☆33Updated 6 years ago