AllenCell / napari-allencell-segmenterLinks
A plugin that enables image segmentation provided by Allen Institute for Cell Science
☆16Updated last year
Alternatives and similar repositories for napari-allencell-segmenter
Users that are interested in napari-allencell-segmenter are comparing it to the libraries listed below
Sorting:
- Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration☆11Updated 4 years ago
- How to use Aligning Big Brains and Atlases with Python☆15Updated 2 years ago
- Create movies from series of key-frames in napari.☆38Updated 4 years ago
- A napari plugin to load & deskew folders of lattice light sheet TIFFs☆13Updated last week
- MultiModal Big Image Data Sharing and Exploration☆15Updated 2 years ago
- Process images using SimpleITK in napari☆21Updated 2 months ago
- A self-supervised denoising algorithm.☆26Updated last year
- Optimize image processing workflows in napari☆18Updated 2 months ago
- Napari gaming☆17Updated 3 years ago
- Napari plugin for custom analysis and visualization of lattice lightsheet and Oblique Plane Microscopy data. The plugin is optimized for …☆13Updated last month
- my first baby steps with Napari☆10Updated 5 years ago
- Registration to BrainGlobe atlases in napari using Elastix☆22Updated this week
- python tools for BigDataViewer☆22Updated 6 months ago
- Accelerated Pixel and Object Classifiers (APOC)☆56Updated 4 months ago
- Training resources for Students at Uni Leipzig who want to dive into bio-image data science with Python. The material will develop betwee…☆38Updated last year
- Benchmarking Large Language Models for Bio-Image Analysis Code Generation☆23Updated 7 months ago
- Tools for distributed alignment of massive images☆84Updated 3 weeks ago
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆26Updated 5 months ago
- ☆44Updated last week
- Process and analyze surfaces using vedo in napari.☆24Updated last year
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆20Updated 7 months ago
- Python module for registering and fusing multi-view microscopy data☆23Updated 4 months ago
- Running compute-intense parts of BigStitcher distributed☆26Updated this week
- Deep Learning segmentation suite designed for 2D microscopy image segmentation☆10Updated 3 years ago
- Archived: control, reconstruction, and analysis code for oblique plane microscopy.☆22Updated 3 months ago
- ☆35Updated 3 weeks ago
- Use Napari Viewer to display CZI images☆11Updated 3 years ago
- ☆22Updated last year
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆16Updated last week
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆35Updated 10 months ago