AllenCell / napari-allencell-segmenterLinks
A plugin that enables image segmentation provided by Allen Institute for Cell Science
☆18Updated 2 months ago
Alternatives and similar repositories for napari-allencell-segmenter
Users that are interested in napari-allencell-segmenter are comparing it to the libraries listed below
Sorting:
- Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration☆11Updated 4 years ago
- python tools for BigDataViewer☆22Updated last year
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆34Updated last year
- Optimize image processing workflows in napari☆17Updated 8 months ago
- A self-supervised denoising algorithm.☆28Updated last year
- A napari plugin to load & deskew folders of lattice light sheet TIFFs☆13Updated 2 weeks ago
- Use Napari Viewer to display CZI images☆11Updated 3 years ago
- How to use Aligning Big Brains and Atlases with Python☆14Updated 2 years ago
- Process images using SimpleITK in napari☆23Updated 8 months ago
- Napari gaming☆17Updated 4 years ago
- Python module for registering and fusing multi-view microscopy data☆24Updated 10 months ago
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆25Updated last month
- ☆37Updated last month
- Napari plugin for custom analysis and visualization of lattice lightsheet and Oblique Plane Microscopy data. The plugin is optimized for …☆14Updated last month
- The known BioVoxxel Toolbox functions now improved for 2D and 3D images☆17Updated last month
- ☆22Updated 2 years ago
- Process and analyze surfaces using vedo in napari.☆25Updated last year
- Accelerated Pixel and Object Classifiers (APOC)☆59Updated 6 months ago
- GPU-accelerated general purpose image processing and image analysis in napari☆36Updated 8 months ago
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆30Updated 8 months ago
- Training resources for Students at Uni Leipzig who want to dive into bio-image data science with Python. The material will develop betwee…☆39Updated last year
- ☆13Updated 5 years ago
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆16Updated 6 months ago
- ☆15Updated 3 years ago
- Archived: control, reconstruction, and analysis code for oblique plane microscopy.☆22Updated 9 months ago
- ☆49Updated last month
- Tools for distributed alignment of massive images☆91Updated last week
- ☆20Updated 8 months ago
- StarDist plugin for napari☆38Updated last year
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆61Updated last year