AllenCell / napari-allencell-segmenterLinks
A plugin that enables image segmentation provided by Allen Institute for Cell Science
☆18Updated 2 months ago
Alternatives and similar repositories for napari-allencell-segmenter
Users that are interested in napari-allencell-segmenter are comparing it to the libraries listed below
Sorting:
- Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration☆11Updated 4 years ago
- python tools for BigDataViewer☆22Updated last year
- Use Napari Viewer to display CZI images☆11Updated 3 years ago
- Napari plugin for custom analysis and visualization of lattice lightsheet and Oblique Plane Microscopy data. The plugin is optimized for …☆14Updated last week
- GPU-accelerated general purpose image processing and image analysis in napari☆36Updated 9 months ago
- ☆38Updated 2 months ago
- Optimize image processing workflows in napari☆17Updated 9 months ago
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆34Updated last year
- A self-supervised denoising algorithm.☆28Updated last year
- Create movies from series of key-frames in napari.☆38Updated 4 years ago
- How to use Aligning Big Brains and Atlases with Python☆14Updated 2 years ago
- Process images using SimpleITK in napari☆23Updated 9 months ago
- Process and analyze surfaces using vedo in napari.☆25Updated last year
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆27Updated 11 months ago
- A napari plugin to load & deskew folders of lattice light sheet TIFFs☆13Updated last month
- Napari gaming☆17Updated 4 years ago
- Training resources for Students at Uni Leipzig who want to dive into bio-image data science with Python. The material will develop betwee…☆39Updated last year
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆30Updated 9 months ago
- ☆22Updated 2 years ago
- Python module for registering and fusing multi-view microscopy data☆24Updated 11 months ago
- Accelerated Pixel and Object Classifiers (APOC)☆59Updated 6 months ago
- Benchmarking Large Language Models for Bio-Image Analysis Code Generation☆25Updated last year
- StarDist plugin for napari☆38Updated last year
- ☆13Updated 5 years ago
- ☆20Updated 9 months ago
- ☆49Updated 2 months ago
- A library to facilitate machine learning on multi-dimensional images.☆88Updated last week
- Reference implementation of the Graph Exchange File Format☆34Updated last week
- 1d plotting in napari-based canvas.☆25Updated this week
- ☆15Updated 3 years ago