NIF-au / TissueStackLinks
Web based Image Viewer developed @ Center for Advanced Imaging [University of Queensland]
☆19Updated 2 years ago
Alternatives and similar repositories for TissueStack
Users that are interested in TissueStack are comparing it to the libraries listed below
Sorting:
- Brain flatmaps generation☆11Updated 3 years ago
- cupy-accelerated DIPY☆11Updated 4 years ago
- python bindings to the ClearVolume project that enables serving numpy data from within python to the renderer.☆15Updated 9 years ago
- Image mapping using the LDDMM algorithm, implemented in tensorflow☆17Updated 4 years ago
- libminc is the core library and API of the MINC toolkit☆19Updated last month
- Toolkit for the generation and analysis of volume eletron microscopy based synaptic connectomes of brain tissue.☆43Updated 6 months ago
- A draft specification for the nifti-zarr format☆16Updated 2 months ago
- DICOM to Nifti conversion with meta data preservation☆78Updated last year
- The ANTsX Ecosystem for Mapping the Mouse Brain☆17Updated 2 months ago
- Matlab function to import ROIs from ImageJ☆27Updated 6 years ago
- Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.☆65Updated 3 weeks ago
- www.vaa3d.org☆80Updated 7 years ago
- WebGL-based viewer for volumetric data☆24Updated this week
- C++ library and command-line software for processing and analysis of terabyte-scale volume images locally or on a computing cluster.☆57Updated 7 months ago
- BigDataViewer-based tool for visualizing multichannel multiscale N5 datasets.☆19Updated this week
- Z-Brain Viewer and Analysis Scripts for MAP-Mapping☆25Updated 9 months ago
- Tools to automate simple manipulations and measurements of medical images and segmentations in nifti format.☆22Updated 8 months ago
- A tool for fast automatic 3D-stitching of teravoxel-sized microscopy images☆93Updated last year
- Software package for neuron reconstruction and visualization☆40Updated 8 months ago
- Developing a Brain Atlas through Deep Learning☆53Updated 5 months ago
- 3D segmention tool☆13Updated 2 years ago
- Python Image Registration Toolkit☆25Updated last year
- Simple pure-python module for reading and writing nrrd files.☆124Updated last year
- www.vaa3d.org : download the latest Binary version here https://github.com/Vaa3D/release/releases/tag/v3.200☆42Updated 4 months ago
- A 2D-3D histological brain slice registration application for mouse, rat, zebrafish brains.☆37Updated 2 years ago
- Version 2 of the minc-toolkit, uses tools based on ITK version 4.x☆53Updated 8 months ago
- Remap, mask, renumber, unique, and in-place transposition of 3D labeled images. Point cloud too.☆63Updated last month
- www.vaa3d.org☆114Updated last year
- Basic minc-tools from former minc repository☆33Updated last year
- A napari plugin for itk-elastix☆39Updated last month