Alternatives and similar repositories for Tax4Fun2_short_tutorial:

Users that are interested in Tax4Fun2_short_tutorial are comparing it to the libraries listed below

• fjossandon / Tax4Fun2
  ☆12Updated 2 years ago
• DaliangNing / iCAMP1
  Infer Community Assembly Mechanisms by Phylogenetic bin-based null model analysis (Version 1)
  ☆73Updated last week
• cafferychen777 / ggpicrust2
  Make Picrust2 Output Analysis and Visualization Easier
  ☆120Updated 2 weeks ago
• UMNFuN / FUNGuild
  FUNGuild: parsing OTUs into functional guilds
  ☆110Updated 9 months ago
• marbits-icm / marbits-public
  ☆14Updated 3 weeks ago
• taowenmicro / ggClusterNet
  Microbial ecological network visualization clustering
  ☆103Updated 10 months ago
• Mengting-Maggie-Yuan / warming-network-complexity-stability
  Computer code for the manuscript "Climate Warming Enhances Microbial Network Complexity and Stability"
  ☆46Updated 3 years ago
• microbiota / amplicon
  Statistics and visualization for amplicon data
  ☆70Updated last year
• Russel88 / MicEco
  Various functions for analysis of microbial community data
  ☆43Updated 2 years ago
• TongZhou2017 / itol.toolkit
  Helper Functions for Interactive Tree Of Life (iTOL)
  ☆164Updated 2 months ago
• gmteunisse / fantaxtic
  Fantaxtic - Nested Bar Plots for Phyloseq Data
  ☆28Updated 7 months ago
• stegen / Stegen_etal_ISME_2013
  Code for running analyses carried out in Stegen et al. 2013, ISME
  ☆29Updated 6 years ago
• danknights / sourcetracker
  ☆71Updated last year
• jbisanz / qiime2R
  Import qiime2 artifacts to R
  ☆164Updated 2 months ago
• yuezhengfu / CNPS.cycle
  This is an R package for element cycle analysis using metagenomic data.
  ☆36Updated 2 months ago
• benjjneb / decontam
  Simple statistical identification and removal of contaminants in marker-gene and metagenomics sequencing data
  ☆153Updated last year
• picrust / picrust
  Phylogenetic Investigation of Communities by Reconstruction of Unobserved STates (PICRUST): Official repository for software and unit tes…
  ☆90Updated 2 years ago
• ChiLiubio / microeco
  An R package for data analysis in microbial community ecology
  ☆216Updated last week
• stefpeschel / NetCoMi
  Network construction, analysis, and comparison for microbial compositional data
  ☆161Updated 2 months ago
• qichao1984 / NCyc
  ☆49Updated 4 years ago
• colinbrislawn / unite-train
  🍄 Qiime2 ITS classifiers for the UNITE database
  ☆36Updated 7 months ago
• cozygene / FEAST
  Fast expectation maximization for microbial source tracking
  ☆121Updated 9 months ago
• yiluheihei / microbiomeMarker
  R package for microbiome biomarker discovery
  ☆173Updated last week
• DaliangNing / NST
  Normalized Stochasticity Ratio in community assembly
  ☆25Updated 3 months ago
• RiceMicrobiome / Edwards-et-al.-2014
  ☆14Updated 10 years ago
• emblab-westlake / MbioAssy
  ☆14Updated last year
• shuojiao / Community-assembly-processes-and-species-coexistences-of-agricultural-soils-microbiome
  ☆19Updated 5 years ago
• Weidong-Chen-Microbial-Ecology / Stochastic-assembly-of-river-microeukaryotes
  ☆11Updated 5 years ago
• ryanjw / co-occurrence
  R scripts for performing co-occurrence analyses
  ☆34Updated 10 years ago
• ChengGaoBerkeley / EPICON.Mycobiome
  ☆13Updated 3 years ago