songweizhi / Tax4Fun2_short_tutorialLinks
A short tutorial for Tax4Fun2
β21Updated last year
Alternatives and similar repositories for Tax4Fun2_short_tutorial
Users that are interested in Tax4Fun2_short_tutorial are comparing it to the libraries listed below
Sorting:
- β17Updated 3 months ago
- π Qiime2 ITS classifiers for the UNITE databaseβ45Updated last month
- FUNGuild: parsing OTUs into functional guildsβ120Updated last year
- Infer Community Assembly Mechanisms by Phylogenetic bin-based null model analysis (Version 1)β86Updated 7 months ago
- Make Picrust2 Output Analysis and Visualization Easierβ156Updated last week
- A scalable high-throughput metabolic and biogeochemical functional trait profilerβ203Updated 7 months ago
- Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbinsβ200Updated 3 weeks ago
- Simple statistical identification and removal of contaminants in marker-gene and metagenomics sequencing dataβ161Updated 2 weeks ago
- Code for running analyses carried out in Stegen et al. 2013, ISMEβ30Updated 7 years ago
- Assessing the quality of metagenome-derived genome bins using machine learningβ227Updated 6 months ago
- BSR-Based Allele Calling Algorithmβ148Updated 2 weeks ago
- β12Updated 6 months ago
- Helper Functions for Interactive Tree Of Life (iTOL)β173Updated last week
- CAT/BAT/RAT: tools for taxonomic classification of contigs and metagenome-assembled genomes (MAGs) and for taxonomic profiling of metageβ¦β220Updated last week
- MOB-suite: Software tools for clustering, reconstruction and typing of plasmids from draft assembliesβ154Updated 5 months ago
- Build a partitioned pangenome graph from microbial genomesβ280Updated this week
- Metatranscriptomics Tutorialβ63Updated 2 years ago
- A user-friendly workflow for phylogenomicsβ219Updated last month
- Code, unit tests, and tutorials for running PICRUSt2β369Updated 5 months ago
- Fantaxtic - Nested Bar Plots for Phyloseq Dataβ31Updated last year
- This repo collects the list of podcasts related to microbiome science: science, microbiology and bioinformatics.β29Updated 3 weeks ago
- Protist Ribosomal Reference database (PR2) - SSU rRNA gene databaseβ82Updated 3 months ago
- This repo collects the list of conferences/meetings/workshops etc. related to microbiome science and tools.β61Updated last week
- β50Updated 4 years ago
- DAS Toolβ157Updated last year
- Fast expectation maximization for microbial source trackingβ129Updated last year
- An updated pipeline for pangenome investigationβ311Updated 6 months ago
- β145Updated last year
- Scan contig files against PubMLST typing schemesβ243Updated 2 years ago
- A tool for generating consensus long-read assemblies for bacterial genomesβ332Updated last week