TongZhou2017 / itol.toolkitLinks
Helper Functions for Interactive Tree Of Life (iTOL)
☆172Updated last week
Alternatives and similar repositories for itol.toolkit
Users that are interested in itol.toolkit are comparing it to the libraries listed below
Sorting:
- Microbial ecological network visualization clustering☆123Updated 5 months ago
- ☆118Updated last month
- Generating iToL annotations from Spreadsheet or CSV files☆103Updated 5 years ago
- phyloseq R☆13Updated 5 years ago
- Metagenome analysis pipeline☆99Updated 4 years ago
- Make Picrust2 Output Analysis and Visualization Easier☆154Updated this week
- Statistics and visualization for amplicon data☆71Updated 2 years ago
- ☆85Updated last year
- ☆125Updated 3 years ago
- Metatranscriptomics Tutorial☆63Updated 2 years ago
- Infer Community Assembly Mechanisms by Phylogenetic bin-based null model analysis (Version 1)☆85Updated 6 months ago
- Computer code for the manuscript "Climate Warming Enhances Microbial Network Complexity and Stability"☆49Updated 3 years ago
- bioBakery workflows is a collection of workflows and tasks for executing common microbial community analyses using standardized, validate…☆117Updated 2 months ago
- FUNGuild: parsing OTUs into functional guilds☆119Updated last year
- ☆113Updated last year
- Nextflow pipeline to analyze PacBio HiFi full-length 16S data☆82Updated last month
- Fast expectation maximization for microbial source tracking☆130Updated last year
- Rice (Oryza Sative) root microbiome time-course analysis. (Zhang2018SCLS)☆32Updated 6 years ago
- ☆14Updated 6 years ago
- ☆14Updated 2 months ago
- Classifiers trained on commonly used variable regions of Prokaryotic 16S rRNA genes☆16Updated last year
- A comprehensive R package for deep mining microbiome☆191Updated last month
- DiTing: A pipeline to infer and compare biogeochemical pathways in metagenomic data☆47Updated 9 months ago
- Data and scripts for amplicon pipeline☆26Updated 6 years ago
- This is the source code for multisamples ARGs profiling using SARG2.0 database☆47Updated 4 years ago
- Analysis of metagenomic shotgun sequences including assembly, speciation, ARG discovery and more☆35Updated 2 years ago
- EasyCodeML: A visual tool for analysis of selection using CodeML☆82Updated 2 years ago
- MaAsLin2: Microbiome Multivariate Association with Linear Models☆145Updated 9 months ago
- PAML is a package of programs for phylogenetic analyses of DNA or protein sequences using maximum likelihood. Please report only **techni…☆167Updated 3 months ago
- EasyStat☆17Updated 3 weeks ago