☆11Apr 25, 2021Updated 4 years ago
Alternatives and similar repositories for seqsal
Users that are interested in seqsal are comparing it to the libraries listed below
Sorting:
- ☆33Sep 19, 2025Updated 5 months ago
- GREMLIN - learn MRF/potts model from input multiple sequence alignment! Implementation now available in C++ and Tensorflow/Python!☆59Oct 17, 2022Updated 3 years ago
- Repository of all EJP lab computational projects☆15Feb 13, 2026Updated 2 weeks ago
- Contact map alignment☆42Feb 3, 2021Updated 5 years ago
- Colorblind-friendly, perceptually uniform palettes for pymol☆20Jan 25, 2021Updated 5 years ago
- A protein structure dataset that combines 3D atomic coordinates with biophysical and evolutionary properties for every atom in every "cle…☆38Jul 25, 2024Updated last year
- functional genomic data integration☆10Sep 22, 2019Updated 6 years ago
- ☆37Oct 16, 2024Updated last year
- Implementation of Protein Invariant Point Packer (PIPPack)☆35May 28, 2024Updated last year
- Universal framework for physically based computational protein design☆37Aug 19, 2023Updated 2 years ago
- E(3) equivariant graph neural network for PPI site prediction☆10Sep 18, 2023Updated 2 years ago
- EvoEF + evolutionary profile for ddG_bind prediction☆14Oct 17, 2025Updated 4 months ago
- Guided Conditional Wasserstein GAN for De Novo Protein Design☆35Feb 23, 2021Updated 5 years ago
- ☆12Jun 19, 2018Updated 7 years ago
- protein docking stuff☆52Sep 2, 2024Updated last year
- ☆13Dec 5, 2024Updated last year
- ☆26May 9, 2022Updated 3 years ago
- Bayesian analysis of MPRA and other high-throughput genomic assays☆10Jul 27, 2020Updated 5 years ago
- some tools for working with protein (PDB) files in tensorflow☆11Jul 9, 2019Updated 6 years ago
- Demos of many Rosetta applications☆22Jun 10, 2025Updated 8 months ago
- Protein Sequence Evolutionary Information Language Model☆13Oct 5, 2023Updated 2 years ago
- mirror of https://zhanglab.ccmb.med.umich.edu/EDTSurf/☆10Jun 20, 2023Updated 2 years ago
- ☆13Feb 3, 2026Updated 3 weeks ago
- Tutorial files☆12Aug 7, 2024Updated last year
- ☆20Oct 4, 2022Updated 3 years ago
- Building more accurate protein structures from backbone torsion angles☆14Mar 21, 2025Updated 11 months ago
- Python package for handling ModelCIF mmCIF and BinaryCIF files☆13Feb 12, 2026Updated 2 weeks ago
- ProteinFeatureAnalyzer extracts, analyzes and visualizes features from protein structures.☆14Mar 14, 2020Updated 5 years ago
- Nextflow pipeline for the computation of structure-based MSAs with AlphaFold2 models☆12Dec 20, 2022Updated 3 years ago
- Physical energy function for protein sequence design☆37May 6, 2023Updated 2 years ago
- Contact map alignment☆16May 10, 2018Updated 7 years ago
- ☆15Sep 5, 2025Updated 5 months ago
- MaveDB database web application☆13Nov 17, 2023Updated 2 years ago
- A curated list of awesome protein design research, software and resources.☆16May 10, 2022Updated 3 years ago
- ☆134Sep 14, 2022Updated 3 years ago
- ☆15Jun 11, 2021Updated 4 years ago
- DAQ: Residue-Wise Local Quality Estimation for Protein Models from Cryo-EM Maps☆17Jan 30, 2026Updated last month
- Prediction of Protein-Small molecule binding affinities☆20Oct 1, 2025Updated 4 months ago
- Voronota is a software tool for analyzing three-dimensional structures of biological macromolecules using the Voronoi diagram of atomic b…☆39Updated this week