tommyhuangthu / UniDesign
a universal framework for computational protein design
☆35Updated last year
Alternatives and similar repositories for UniDesign:
Users that are interested in UniDesign are comparing it to the libraries listed below
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆65Updated 4 months ago
- PyDock Tutorial☆30Updated 6 years ago
- Modelling of Large Protein Complexes☆37Updated 10 months ago
- ☆77Updated 3 months ago
- Making Protein folding accessible to all!☆19Updated last year
- ☆24Updated 5 months ago
- A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons☆33Updated 2 years ago
- ☆56Updated last month
- ☆38Updated last year
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆38Updated 8 months ago
- ☆41Updated 4 months ago
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆35Updated 3 months ago
- Scores for Hydrophobicity and Charges based on SASAs☆25Updated 4 months ago
- Open source code for AlphaFold.☆37Updated 2 years ago
- ☆28Updated last year
- Computer aided proximal decaging as a universal strategy for temporal protein activation☆21Updated 5 years ago
- pyPept: a python library to generate atomistic 2D and 3D representations of peptides☆66Updated 4 months ago
- scripts to find PBD structures for cancer driver proteins☆29Updated this week
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆27Updated 7 months ago
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆25Updated 9 months ago
- Analysis of contacts in molecular dynamics trajectories☆42Updated 5 years ago
- Automatic gromacs protocol from preparation to production with ligand parametrization through☆59Updated 3 months ago
- Fast and accurate protein domain segmentation using Invariant Point Attention☆30Updated last month
- ☆13Updated 2 months ago
- Modelling protein conformational landscape with Alphafold☆37Updated last week
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆44Updated 3 weeks ago
- Efficient manipulation of protein structures in Python☆50Updated 2 months ago
- ☆44Updated 2 weeks ago
- Binding pocket optimization based on force fields and docking scoring functions☆30Updated last month