issararab / PEvoLMLinks
Protein Sequence Evolutionary Information Language Model
☆12Updated last year
Alternatives and similar repositories for PEvoLM
Users that are interested in PEvoLM are comparing it to the libraries listed below
Sorting:
- Molecular dynamics without molecules: searching the conformational space of proteins with generative neural networks☆11Updated 3 years ago
- Guiding diffusion models for antibody sequence and structure co-design with developability properties.☆33Updated 8 months ago
- ☆13Updated 3 months ago
- ☆22Updated last month
- IDPFold test version☆21Updated 10 months ago
- DyNoPy☆11Updated 10 months ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆51Updated last month
- ☆34Updated 2 weeks ago
- ☆27Updated 7 months ago
- GUI for interactive graph-based analyses of hydrogen bond networks in crystal structures and MD trajectories.☆9Updated 2 years ago
- Conditioning diffusion models for scaffolding protein motifs. A repository for my master's dissertation.☆10Updated 7 months ago
- ☆13Updated 5 months ago
- Official implementation of NeurIPS'24 paper "Bridge-IF: Learning Inverse Protein Folding with Markov Bridges"☆13Updated 4 months ago
- List of papers on protein binding site prediction☆11Updated last year
- Generative diverse protein backbones by protein language model☆32Updated 7 months ago
- Some scripts that I keep using over and over.☆19Updated last week
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆31Updated last year
- Implementation of Protein Invariant Point Packer (PIPPack)☆32Updated last year
- ☆14Updated last month
- A convinent tool to visualize AlphaFold 3 prediction results with PyMOL and matplotlib☆18Updated last year
- Tutorial files☆11Updated 11 months ago
- ☆13Updated 4 years ago
- ☆13Updated last year
- A conditionally adapted protein language model for the generation of enzymes☆21Updated 7 months ago
- bakerlab pymol scripts☆24Updated 5 years ago
- Extension of ThermoMPNN for double mutant predictions☆36Updated 2 weeks ago
- Making Protein folding accessible to all!☆22Updated last year
- Resources for the BioML Challenge 2024: Bits to Binders☆16Updated 10 months ago
- scripts to find PBD structures for cancer driver proteins☆31Updated 4 months ago
- Codebase for our preprint using trRosetta to design proteins with discontinuous functional sites, found here: https://www.biorxiv.org/con…☆16Updated 3 years ago