Alternatives and similar repositories for map_align

Users that are interested in map_align are comparing it to the libraries listed below

• gjoni / map_align
  Contact map alignment
  ☆16Updated 7 years ago
• KIT-MBS / pydca
  Direct coupling analysis software for protein and RNA sequences
  ☆58Updated 6 months ago
• proteinphysiologylab / frustratometeR
  ☆39Updated 7 months ago
• ELELAB / mutatex
  scripts and facilities for in-silico mutagenesis with FoldX
  ☆65Updated last month
• PDB-REDO / alphafill
  AlphaFill is an algorithm based on sequence and structure similarity that “transplants” missing compounds to the AlphaFold models. By add…
  ☆110Updated last week
• labstructbioinf / localpdb
  Python package to manage protein structures and their annotations
  ☆45Updated last year
• ranganathanlab / bmDCA
  Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).
  ☆35Updated 5 years ago
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆56Updated 5 months ago
• MPI-Dortmund / pymissense
  PyMissense creates the pathogenicity plot and modified pdb as shown in the AlphaMissense paper for custom proteins.
  ☆23Updated 2 years ago
• psipred / s4pred
  A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence
  ☆63Updated 10 months ago
• churchlab / low-N-protein-engineering
  Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".
  ☆60Updated 4 years ago
• sokrypton / GREMLIN_CPP
  GREMLIN - learn MRF/potts model from input multiple sequence alignment! Implementation now available in C++ and Tensorflow/Python!
  ☆58Updated 3 years ago
• minmarg / gtalign_alpha
  GTalign, high-performance protein structure alignment, superposition and search
  ☆54Updated 5 months ago
• fhalab / evSeq
  Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.
  ☆34Updated 3 years ago
• patrickbryant1 / SpeedPPI
  Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning
  ☆90Updated last year
• dina-lab3D / CombFold
  ☆91Updated last year
• haddocking / haddock-tools
  Set of useful HADDOCK utility scripts
  ☆57Updated 4 months ago
• psipred / Merizo
  Fast and accurate protein domain segmentation using Invariant Point Attention
  ☆46Updated 8 months ago
• tristanic / pae_to_domains
  Graph-based community clustering approach to extract protein domains from a predicted aligned error matrix
  ☆35Updated 3 years ago
• SNU-CSSB / RF2-Lite
  ☆33Updated last year
• CongLabCode / DPAM
  A domain parser for Alphafold models
  ☆46Updated 2 years ago
• JoaoRodrigues / interfacea
  An open-source library for the analysis of protein interactions.
  ☆33Updated 4 years ago
• debbiemarkslab / EVmutation
  Mutation effects predicted from sequence co-variation
  ☆72Updated 8 years ago
• ncbi / SSDraw
  ☆87Updated 2 months ago
• lhatsk / AlphaLink
  AlphaLink: Integrating crosslinking MS data into OpenFold
  ☆72Updated 2 years ago
• BrooksResearchGroup-UM / PEVAE_Paper
  Deciphering protein evolution and fitness landscapes with latent space models
  ☆37Updated 4 years ago
• JudeWells / chainsaw
  ☆47Updated last year
• cmbi / dssp
  The DSSP building software
  ☆50Updated 2 years ago
• Rappsilber-Laboratory / AlphaLink2
  AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer
  ☆62Updated 5 months ago
• jsunn-y / ALDE
  Active Learning-Assisted Directed Evolution for Protein Engineering
  ☆78Updated 3 months ago