johnnytam100 / awesome-protein-designLinks
A curated list of awesome protein design research, software and resources.
☆16Updated 3 years ago
Alternatives and similar repositories for awesome-protein-design
Users that are interested in awesome-protein-design are comparing it to the libraries listed below
Sorting:
- Transformer for protein function prediction (version 2)☆15Updated 3 weeks ago
- Structural space exploration of AlphaFold DB☆12Updated 4 years ago
- Welcome to Colab_NAMD_suit, your gateway to running MD simulations!☆17Updated last year
- Python generic modular semi-automated platform containing functions for the classification of proteins based on their physicochemical pro…☆35Updated 2 years ago
- StarGazer is a tool designed for rapidly assessing drug repositioning opportunities. It combines multi-source, multi-omics data with a no…☆35Updated 2 years ago
- iFeatureOmega is a comprehensive platform for generating, analyzing and visualizing more than 170 representations for biological sequence…☆32Updated 2 years ago
- Code, intermediate results and an interactive visualisation on prediction of putative novel enzymes and small molecule binding proteins p…☆27Updated 2 years ago
- R Shiny application "Vaccine Designer" aiming for the construction of vaccine sequences based on multi epitope design workflow.☆10Updated last year
- a collection of colabs useful for molecular biology☆32Updated last year
- ☆48Updated last month
- scripts and facilities for in-silico mutagenesis with FoldX☆65Updated 3 weeks ago
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆29Updated 6 months ago
- Machine learning-driven antibody design☆63Updated 2 years ago
- ☆23Updated 2 years ago
- A protein structure dataset that combines 3D atomic coordinates with biophysical and evolutionary properties for every atom in every "cle…☆38Updated last year
- Graph Network for protein-protein interface including language model features☆34Updated last year
- PDBClean helps create a curated ensemble of molecular structures☆14Updated 3 months ago
- A deep-learning-based multiple toolkits (DeTool) approach that uses the inputs of enzymes and substrates for biocatalystic tasks.☆10Updated 2 years ago
- Code for generating model and predictions for CAFA5 competition 2023 (4th place solution)☆17Updated last year
- MEGADOCK on Google Colaboratory☆20Updated 2 years ago
- ☆16Updated 5 months ago
- Geometry-aware protein binding site predictor☆25Updated last year
- DE-STRESS is a model evaluation pipeline that aims to make protein design more reliable and accessible.☆29Updated 10 months ago
- ☆32Updated 4 months ago
- ☆39Updated 7 months ago
- Python package and command line tool for epitope prediction☆52Updated last year
- ☆22Updated last year
- [Nature Machine Intelligence] ImmunoStruct enables multimodal deep learning for immunogenicity prediction☆31Updated last week
- Sniffing out new drugs☆23Updated 2 years ago
- KDS software for Kinase Drug Selectivity☆11Updated 2 years ago