A curated list of awesome protein design research, software and resources.
☆17May 10, 2022Updated 4 years ago
Alternatives and similar repositories for awesome-protein-design
Users that are interested in awesome-protein-design are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Automatic protein labelling in PyMOL☆12May 18, 2026Updated 5 months ago
- ML toolset for creating TED: The Encyclopedia of Domains☆29May 29, 2025Updated last year
- Directed evolution with machine learning by Solugen☆15Nov 4, 2024Updated 2 years ago
- The software system of improving AlphaFold2- and AlphaFold-Multimer-based protein tertiary & quaternary structure prediction. It was deve…☆33Dec 14, 2023Updated 2 years ago
- Calculating a range of protein descriptors using their physicochemical, biological and structural properties 🔬.☆17Oct 19, 2026Updated 2 weeks ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Protein preparation for MD, made faster and easier !☆15Dec 18, 2023Updated 2 years ago
- Ligand-binding site classification with deep graph neural networks.☆10Sep 24, 2023Updated 3 years ago
- ☆12Jun 3, 2025Updated last year
- ☆12Sep 10, 2026Updated last month
- Partner specific prediction of protein binding sites☆10Mar 13, 2023Updated 3 years ago
- Scoring alignments by embedding vector similarity☆15Jul 17, 2026Updated 3 months ago
- A deep-learning-based multiple toolkits (DeTool) approach that uses the inputs of enzymes and substrates for biocatalystic tasks.☆14Nov 24, 2023Updated 2 years ago
- ☆13May 24, 2026Updated 5 months ago
- A protein structure dataset that combines 3D atomic coordinates with biophysical and evolutionary properties for every atom in every "cle…☆40Jul 25, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆11Apr 25, 2021Updated 5 years ago
- Identifies relevant ligands in the PDB☆10Oct 30, 2026Updated last week
- ☆10Mar 11, 2023Updated 3 years ago
- ☆14Aug 29, 2024Updated 2 years ago
- ☆14Oct 27, 2024Updated 2 years ago
- Analysing Sequence Activity Relationships (SARs) of protein sequences and their mutants using Machine Learning.☆10Jul 25, 2026Updated 3 months ago
- Clustering of SES virtual probes for pocket generation and ranking via Isolation Forest☆14Mar 22, 2023Updated 3 years ago
- Adaptive resampling for machine learning in single-cell biology☆14Sep 30, 2026Updated last month
- ☆10Feb 11, 2022Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- autoprot provides standardised, fast, and reliable proteomics data analysis while ensuring a high customisability needed to tailor the an…☆12Sep 30, 2026Updated last month
- ☆22Sep 1, 2025Updated last year
- Load bioinformatics datasets into a local database☆11Apr 8, 2025Updated last year
- 2D portraits of 3D protein structures☆27May 14, 2026Updated 5 months ago
- Protein Sequence Evolutionary Information Language Model☆14Oct 5, 2023Updated 3 years ago
- An Interface-Predicting Language Model for Designing Peptide-Guided Protein Degraders☆18Sep 10, 2024Updated 2 years ago
- WARNING: This repository is no longer maintained ⚠️ This repository will not be updated. The repository will be kept available in read-on…☆11Nov 15, 2017Updated 8 years ago
- DAQ: Residue-Wise Local Quality Estimation for Protein Models from Cryo-EM Maps☆17Jan 30, 2026Updated 9 months ago
- Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.☆36Jun 1, 2022Updated 4 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Code for Nanodesigner: resolving the complex-CDR interdependency with iterative refinement paper☆17Oct 26, 2026Updated last week
- The ProtVista tool for protein feature visualisation☆24Oct 31, 2026Updated last week
- ☆41Mar 25, 2026Updated 7 months ago
- LABind: Identifying Protein Binding Ligand-Aware Sites via Learning Interactions Between Ligand and Protein☆18Aug 21, 2025Updated last year
- Protein-peptide docking with ESMFold language model☆16May 30, 2026Updated 5 months ago
- XMSS (eXtended Merkle Signature Scheme ) in golang☆14Jun 3, 2019Updated 7 years ago
- An easy-to-use and interactive web application for FragPipe☆15Mar 8, 2026Updated 7 months ago