spetti / SMURFLinks
☆132Updated 2 years ago
Alternatives and similar repositories for SMURF
Users that are interested in SMURF are comparing it to the libraries listed below
Sorting:
- Evolutionary velocity with protein language models☆94Updated last year
- Fast protein structure searching or your money back☆111Updated 4 months ago
- ☆58Updated 2 years ago
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆59Updated 4 years ago
- De novo protein structure prediction using iteratively predicted structural constraints☆60Updated 3 years ago
- ☆70Updated 10 months ago
- Predict the structure of immune receptor proteins☆53Updated 9 months ago
- A structure-based, alignment-free embedding approach for proteins. Can be used as input to machine learning algorithms.☆40Updated 2 years ago
- ☆36Updated 7 months ago
- ☆32Updated last week
- ☆24Updated 2 years ago
- Biological prediction models made simple.☆44Updated last week
- Using Transformer protein embeddings with a linear attention mechanism to make SOTA de-novo predictions for the subcellular location of p…☆66Updated last year
- Improving RNA structure prediction through multitask learning on diverse crowdsourced data.☆62Updated last year
- ☆107Updated last year
- Protein design and variant prediction using autoregressive generative models☆110Updated last year
- Stochastic Sequence Propagation - A Keras Model for optimizing DNA, RNA and protein sequences based on a predictor☆48Updated last year
- Neural Networks for Protein Sequence Alignment☆125Updated 9 months ago
- Repository for publicly available deep learning models developed in Rosetta community☆118Updated 3 years ago
- Mutation effects predicted from sequence co-variation☆68Updated 7 years ago
- A NumPy port of the foldseek code for encoding protein structures to 3di.☆70Updated last week
- ☆69Updated 4 months ago
- Fast and accurate protein structure prediction☆54Updated 7 months ago
- Compressing protein structures effectively with torsion angles☆174Updated last month
- Deep networks for protein functional inference☆176Updated 2 months ago
- PLMSearch enables accurate and fast homologous protein search with only sequences as input☆73Updated 8 months ago
- RNA Secondary Structure Prediction using an Ensemble of Two-dimensional Deep Neural Networks and Transfer Learning.☆105Updated 3 months ago
- Protein sequence classification with self-supervised pretraining☆82Updated 3 years ago
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆91Updated last year
- Protein Design by Machine Learning guided Directed Evolution☆44Updated 4 months ago