andrewGhazi / malacodaLinks
Bayesian analysis of MPRA and other high-throughput genomic assays
☆10Updated 4 years ago
Alternatives and similar repositories for malacoda
Users that are interested in malacoda are comparing it to the libraries listed below
Sorting:
- Refining the impact of genetic evidence on clinical success☆25Updated 11 months ago
- Building the constrained coding regions (CCR) model☆16Updated 6 years ago
- Comprehensive Human Expressed SequenceS☆17Updated 10 months ago
- scpca-nf is the Nextflow workflow for processing Single-cell Pediatric Cancer Atlas Portal data☆13Updated this week
- Bioinformatics for Benched Biologists☆22Updated 5 years ago
- Bedfile perturbation tool☆17Updated last year
- Explore the cancer relevance of your gene list☆51Updated 3 months ago
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆31Updated 4 years ago
- Modular package for generation of sets of ranges representing the null hypothesis. These can take the form of bootstrapped ranges (bootRa…☆27Updated 2 months ago
- Analysis for svaseq paper☆19Updated 10 years ago
- Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R☆30Updated 8 months ago
- ImReP is a computational method for rapid and accurate profiling of the adaptive immune repertoire from regular RNA-Seq data.☆28Updated 5 years ago
- RNA-seq for Mendelian disease diagnostics: A hands-on tutorial through bioinformatic tools and workflows☆17Updated 3 years ago
- Build single sample pair-based (rule-based) classifiers using top-score pairs or random forest for multi-class problems.☆12Updated 2 years ago
- Toolkit for benchmarking fusion transcript predictions☆19Updated 10 months ago
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆26Updated last year
- Pairtree is a method for reconstructing cancer evolutionary history in individual patients, and analyzing intratumor genetic heterogeneit…☆37Updated last year
- PRS-on-SPARK☆18Updated 4 years ago
- Suite of heritability and genetic correlation estimation tools for exome-sequencing data☆34Updated 4 months ago
- ☆17Updated last year
- Differential Mutation Analysis☆11Updated 5 years ago
- ☆27Updated 2 years ago
- Perturb-seq analysis package☆14Updated last year
- FREE Divergence Error-Correcting DNA Barcodes☆9Updated 7 years ago
- V'DJer - B Cell Receptor Repertoire Reconstruction from short read mRNA-Seq data☆29Updated 2 years ago
- An automated pipe for reproducible RNA-seq analysis with the minimal efforts from researchers. You only need to provide the taxa name and…☆14Updated 3 years ago
- A Shiny web server for interactive visualization and analysis of RNA-seq data☆23Updated 4 years ago
- Toolbox package for organizing and working with TCGA data☆28Updated 2 weeks ago
- Create QC and summary reports for Alevin output☆32Updated 2 months ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆29Updated 10 months ago