Kortemme-Lab / protein_feature_analysisLinks
ProteinFeatureAnalyzer extracts, analyzes and visualizes features from protein structures.
☆12Updated 5 years ago
Alternatives and similar repositories for protein_feature_analysis
Users that are interested in protein_feature_analysis are comparing it to the libraries listed below
Sorting:
- De novo design of small molecule binding sites into proteins☆12Updated 4 years ago
- Rosetta FunFolDes – a general framework for the computational design of functional proteins.☆20Updated 6 years ago
- ☆33Updated last year
- Extract ligand binding sites from PDB. Match the binding sites to de novo scaffolds.☆11Updated 4 years ago
- ☆9Updated 2 weeks ago
- Codebase for our preprint using trRosetta to design proteins with discontinuous functional sites, found here: https://www.biorxiv.org/con…☆16Updated 3 years ago
- ProteinDesign with RFdiffusion and ProteinMPNN/LigandMPNN☆18Updated 4 months ago
- Convert coarse-grained protein structure to all-atom model☆40Updated last month
- Modelling protein conformational landscape with Alphafold☆51Updated 3 weeks ago
- A Motif Hash Based Method for Matching Crosslinkers into Peptides and Proteins☆20Updated last year
- A variational autoencoder that directly generates the 3D coordinates of immunoglobulin protein backbones.☆28Updated 2 years ago
- Making Protein folding accessible to all!☆22Updated last year
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆51Updated last month
- scripts to find PBD structures for cancer driver proteins☆31Updated 4 months ago
- ☆34Updated 2 weeks ago
- Protein design and sculpting using Rosetta and Deep learning methods (RFDiff and Alphafold2)☆27Updated this week
- ☆19Updated 2 years ago
- ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.☆29Updated last week
- ☆68Updated last year
- ☆28Updated last year
- Structure prediction and design of proteins with noncanonical amino acids☆78Updated last week
- Some scripts that I keep using over and over.☆19Updated last week
- ☆9Updated last year
- Boltzmann-ranked alternative protein conformations from reduced-MSA AlphaFold2☆49Updated last week
- ☆14Updated 2 months ago
- mdml: Deep Learning for Molecular Simulations☆43Updated last month
- Scores for Hydrophobicity and Charges based on SASAs☆31Updated last month
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆39Updated last year
- ☆13Updated 4 years ago
- DLPacker☆31Updated 10 months ago