Kortemme-Lab / protein_feature_analysisLinks
ProteinFeatureAnalyzer extracts, analyzes and visualizes features from protein structures.
☆12Updated 5 years ago
Alternatives and similar repositories for protein_feature_analysis
Users that are interested in protein_feature_analysis are comparing it to the libraries listed below
Sorting:
- De novo design of small molecule binding sites into proteins☆12Updated 4 years ago
- Rosetta FunFolDes – a general framework for the computational design of functional proteins.☆19Updated 6 years ago
- Some scripts that I keep using over and over.☆18Updated 5 months ago
- Using Rotamer Interaction Fields from RIFGen/Dock in python☆16Updated 4 years ago
- Codebase for our preprint using trRosetta to design proteins with discontinuous functional sites, found here: https://www.biorxiv.org/con…☆16Updated 3 years ago
- ☆11Updated 5 years ago
- ProteinDesign with RFdiffusion and ProteinMPNN/LigandMPNN☆15Updated 3 months ago
- A Motif Hash Based Method for Matching Crosslinkers into Peptides and Proteins☆18Updated last year
- ☆19Updated 2 years ago
- ☆32Updated last year
- ☆9Updated last month
- Building more accurate protein structures from backbone torsion angles☆14Updated 3 months ago
- Code for designing binders to flexible peptides with AlphaFold2 Hallucination☆23Updated last year
- ☆32Updated last year
- Extract ligand binding sites from PDB. Match the binding sites to de novo scaffolds.☆11Updated 4 years ago
- ☆35Updated last year
- ☆28Updated last year
- Physical energy function for protein sequence design☆30Updated 2 years ago
- ☆9Updated 7 months ago
- What exactly are the non-canonical amino acids in the Rosetta database folder?☆11Updated 5 years ago
- ☆13Updated 4 years ago
- PPI version of Pythia☆11Updated 7 months ago
- The gmx_rrcs script is designed to calculate the residues-residues contact scores (rrcs) from a trajectory file generated by GROMACS.☆16Updated last week
- Some Rosetta Scripts that allow for various simple tasks☆14Updated 5 years ago
- This repository contains the AlphaCutter.py for the removal of non-globular regions from predicted protein structures.☆15Updated last year
- DLPacker☆31Updated 10 months ago
- Software for the prediction of DEER and PRE data from conformational ensembles.☆12Updated last month
- Scripts and data deposition for de novo heterodimers manuscript☆11Updated 6 years ago
- ☆26Updated last month
- Making Protein folding accessible to all!☆22Updated last year