Guided Conditional Wasserstein GAN for De Novo Protein Design
☆35Feb 23, 2021Updated 5 years ago
Alternatives and similar repositories for gcWGAN
Users that are interested in gcWGAN are comparing it to the libraries listed below
Sorting:
- Bayesian Active Learning for Optimization and Uncertainty Quantification with Applications to Protein Docking☆13Apr 28, 2021Updated 4 years ago
- Deep Generative Models for Drug Combination (Graph Set) Generation given Hierarchical Disease Network Embedding☆31Mar 25, 2023Updated 2 years ago
- Protein-compound affinity prediction through unified RNN-CNN☆153Jul 19, 2024Updated last year
- Preforms De novo protein design using machine learning and PyRosetta to generate a novel protein structure☆52Mar 7, 2025Updated last year
- Variational autoencoder for protein sequences - add metal binding sites and generate sequences for novel topologies☆94Jul 13, 2023Updated 2 years ago
- Energy-based Graph Convolutional Networks for Scoring Protein Docking Models☆12Aug 31, 2021Updated 4 years ago
- software used in paper "Antibody interface prediction with 3D Zernike descriptors and SVM"☆13Mar 28, 2021Updated 4 years ago
- Code for Fold2Seq paper from ICML 2021☆50May 25, 2022Updated 3 years ago
- ☆11Apr 25, 2021Updated 4 years ago
- Code for our paper "Protein sequence design with a learned potential"☆34Aug 5, 2021Updated 4 years ago
- ☆18Mar 13, 2024Updated 2 years ago
- ☆11Aug 5, 2020Updated 5 years ago
- Learning protein representation for rigid-body docking☆22Nov 2, 2019Updated 6 years ago
- De novo design of small molecule binding sites into proteins☆12Apr 14, 2021Updated 4 years ago
- A C, C++, Python project focusing on Docking analysis, Source code, Blogs, Data availability, References.☆26Jan 27, 2026Updated last month
- Computes a molecular graph for protein structures.☆59Updated this week
- Codebase for our preprint using trRosetta to design proteins with discontinuous functional sites, found here: https://www.biorxiv.org/con…☆16Oct 27, 2021Updated 4 years ago
- ☆27Feb 16, 2022Updated 4 years ago
- Semantic Segmentor for Protein Structures.☆11Dec 20, 2021Updated 4 years ago
- protein backbone refinement☆15Sep 12, 2024Updated last year
- Improved ab initio protein structure reconstruction☆15Mar 7, 2018Updated 8 years ago
- Database of Interacting Protein Structures (DIPS)☆105Jan 26, 2024Updated 2 years ago
- [NeurIPS 2019] LOIS: Learning to Optimize In Swarms, guided by posterior estimation☆18Aug 14, 2021Updated 4 years ago
- ☆20Oct 4, 2022Updated 3 years ago
- The Visualization of Protein-Ligand Graphs software that powers the PTGL☆15Apr 4, 2024Updated last year
- Protein generative model conditioned on Gene Ontology terms☆35Jul 17, 2022Updated 3 years ago
- Python 3 implementation of Jinbo Xu's paper "Distance-based protein folding powered by deep learning", PNAS August 20, 2019 116 (34)☆20Aug 2, 2022Updated 3 years ago
- A package to predict protein inter-residue geometries from sequence data☆222Sep 27, 2021Updated 4 years ago
- ☆13Dec 5, 2024Updated last year
- Structural space exploration of AlphaFold DB☆12Oct 8, 2021Updated 4 years ago
- mirror of https://zhanglab.ccmb.med.umich.edu/EDTSurf/☆10Jun 20, 2023Updated 2 years ago
- Neural network model for prediction of amino-acid sequence from a protein backbone structure☆25Mar 5, 2025Updated last year
- Source code for ICLR 2021 paper: "Molecule Optimization by Explainable Evolution"☆30May 29, 2021Updated 4 years ago
- ☆39Mar 7, 2026Updated 2 weeks ago
- Implementation of Protein Invariant Point Packer (PIPPack)☆35May 28, 2024Updated last year
- ☆13Nov 12, 2021Updated 4 years ago
- Building more accurate protein structures from backbone torsion angles☆15Mar 21, 2025Updated last year
- Improving protein function prediction with synthetic feature samples created by generative adversarial networks☆22Oct 6, 2020Updated 5 years ago
- A protein structure dataset that combines 3D atomic coordinates with biophysical and evolutionary properties for every atom in every "cle…☆39Jul 25, 2024Updated last year