kiharalab / DAQLinks
DAQ: Residue-Wise Local Quality Estimation for Protein Models from Cryo-EM Maps
☆16Updated 4 months ago
Alternatives and similar repositories for DAQ
Users that are interested in DAQ are comparing it to the libraries listed below
Sorting:
- CryoREAD: a computational tool using deep learning to automatically build full DNA/RNA atomic structure from cryo-EM map.☆29Updated 8 months ago
- Emap2sec+: Detecting Protein and DNA/RNA Structures in Cryo-EM Maps of Intermediate Resolution Using Deep Learning☆17Updated 10 months ago
- ☆83Updated 9 months ago
- Deep learning tools for converting cryo-EM density maps to protein structures☆16Updated 5 months ago
- ☆31Updated this week
- MapQ is a plugin for UCSF Chimera to calculate Q-scores of an atomic model in a cryoEM map.☆14Updated 3 weeks ago
- Homomer symmetry prediction from protein sequence☆28Updated 3 months ago
- SWift and Optimized Recognition of protein Domains☆30Updated 9 months ago
- ☆19Updated last week
- AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer☆57Updated last month
- Fragment binding prediction with ColabFold☆35Updated 3 months ago
- DiffModeler: a diffusion model based protein complex structure modeling tool.☆51Updated last month
- DeepMainmast☆13Updated 10 months ago
- cryoID identifies the protein(s) in unknown near-atomic resolution cryoEM density maps from a pool of candidate proteins.☆13Updated 5 years ago
- From cryo-EM density map to atomic structure☆30Updated 6 months ago
- Public version for Distance-AF☆22Updated 3 weeks ago
- A geometric deep learning method for refining and assessing protein complex structures.☆15Updated 2 years ago
- ☆27Updated 2 years ago
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆27Updated last year
- Fast deep learning methods for large-scale protein-protein interaction screening☆41Updated last month
- ☆15Updated 2 years ago
- ☆19Updated last year
- Code for "Protein Docking Model Evaluation by Graph Neural Networks"☆59Updated 2 years ago
- Predicting the effect of mutations on protein stability using a simple orientational potential.☆16Updated 11 months ago
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆39Updated last year
- ☆9Updated 4 years ago
- ☆11Updated 2 years ago
- Modelling protein conformational landscape with Alphafold☆51Updated this week
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆28Updated last year
- ☆35Updated last year