sokrypton / seqmodelsLinks
☆31Updated 4 years ago
Alternatives and similar repositories for seqmodels
Users that are interested in seqmodels are comparing it to the libraries listed below
Sorting:
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆60Updated 4 years ago
- Predict the structure of immune receptor proteins☆52Updated 9 months ago
- ☆36Updated 6 months ago
- Results and data from the pilot round of the Protein Engineering Tournament☆30Updated 4 months ago
- Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."☆70Updated last year
- Fast deep learning methods for large-scale protein-protein interaction screening☆48Updated last week
- Repository for Protein-Vec, a protein embedding mixture of experts model☆38Updated last year
- Fast and accurate protein structure prediction☆53Updated 6 months ago
- Parametric Building of de novo Functional Topologies☆45Updated 3 years ago
- Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).☆35Updated 4 years ago
- Fragment binding prediction with ColabFold☆35Updated 4 months ago
- ☆30Updated 2 months ago
- A structure-based, alignment-free embedding approach for proteins. Can be used as input to machine learning algorithms.☆39Updated 2 years ago
- Code for our paper "Protein sequence design with a learned potential"☆79Updated last year
- ☆18Updated 5 months ago
- Code, intermediate results and an interactive visualisation on prediction of putative novel enzymes and small molecule binding proteins p…☆26Updated 2 years ago
- PDBench is a dataset and software package for evaluating fixed-backbone sequence design algorithms.☆29Updated 2 years ago
- Ultra-fast in-silico structure mutation☆34Updated 4 months ago
- PLM-interact: extending protein language models to predict protein-protein interactions.☆28Updated this week
- RNA Multiple Sequence Alignment☆43Updated 2 years ago
- Neural networks for deep mutational scanning data☆69Updated 2 months ago
- ☆43Updated 6 months ago
- AlphaLink: Integrating crosslinking MS data into OpenFold☆68Updated last year
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆70Updated last month
- Protein design and variant prediction using autoregressive generative models☆108Updated last year
- Graph Network for protein-protein interface including language model features☆32Updated last year
- Prediction of binding residues for metal ions, nucleic acids, and small molecules.☆32Updated 7 months ago
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆78Updated last year
- Neural networks to fit interpretable models and quantify energies, energetic couplings, epistasis, and allostery from deep mutational sca…☆51Updated 3 months ago
- ☆25Updated 5 years ago