sokrypton / seqmodels
☆30Updated 4 years ago
Alternatives and similar repositories for seqmodels:
Users that are interested in seqmodels are comparing it to the libraries listed below
- PDBench is a dataset and software package for evaluating fixed-backbone sequence design algorithms.☆28Updated 2 years ago
- Predict the structure of immune receptor proteins☆48Updated 5 months ago
- Ultra-fast in-silico structure mutation☆32Updated last week
- Python package to manage protein structures and their annotations☆42Updated last year
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆58Updated 4 years ago
- Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).☆34Updated 4 years ago
- ☆34Updated 3 years ago
- Code for holographic machine learning of proteins☆23Updated 5 months ago
- ☆37Updated 3 months ago
- dMaSIF implementation for google colab☆32Updated 2 years ago
- pyFoldX: python bindings for FoldX.☆44Updated 3 years ago
- Fast deep learning methods for large-scale protein-protein interaction screening☆36Updated 6 months ago
- A domain parser for Alphafold models☆34Updated last year
- Graph-based community clustering approach to extract protein domains from a predicted aligned error matrix☆35Updated 2 years ago
- This repo contains the results data for Round 1 of Adaptyv Bio’s EGFR Protein Design Competition.☆33Updated 4 months ago
- ☆65Updated 3 weeks ago
- The software system of improving AlphaFold2- and AlphaFold-Multimer-based protein tertiary & quaternary structure prediction. It was deve…☆28Updated last year
- Code for our paper "Protein sequence design with a learned potential"☆34Updated 3 years ago
- Fast and accurate protein structure prediction☆51Updated 2 months ago
- A structure-based, alignment-free embedding approach for proteins. Can be used as input to machine learning algorithms.☆37Updated last year
- ☆36Updated 3 months ago
- pdbx is a parser module in python for structures of the protein data bank in the mmcif format☆26Updated 8 months ago
- ☆28Updated 11 months ago
- Parametric Building of de novo Functional Topologies☆44Updated 3 years ago
- AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer☆56Updated this week
- Metrics for our protein design competitions.☆26Updated 5 months ago
- Repository for Protein-Vec, a protein embedding mixture of experts model☆37Updated last year
- ☆26Updated 6 months ago
- ☆21Updated 5 months ago
- Learning Protein Constitutive Motifs from Sequence Data: RBM toolbox☆20Updated 6 years ago