☆34Sep 19, 2025Updated last year
Alternatives and similar repositories for seqmodels
Users that are interested in seqmodels are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆11Apr 25, 2021Updated 5 years ago
- functional genomic data integration☆10Sep 22, 2019Updated 7 years ago
- GREMLIN - learn MRF/potts model from input multiple sequence alignment! Implementation now available in C++ and Tensorflow/Python!☆61Oct 17, 2022Updated 4 years ago
- Contact map alignment☆44Feb 3, 2021Updated 5 years ago
- some tools for working with protein (PDB) files in tensorflow☆11Jul 9, 2019Updated 7 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Contact map alignment☆16May 10, 2018Updated 8 years ago
- ☆137Sep 14, 2022Updated 4 years ago
- A protein structure dataset that combines 3D atomic coordinates with biophysical and evolutionary properties for every atom in every "cle…☆40Jul 25, 2024Updated 2 years ago
- a pytorch version for GREMLIN, used to predict the protein contacts by coevolution method.☆17May 30, 2021Updated 5 years ago
- ☆27May 9, 2022Updated 4 years ago
- ☆20Jul 16, 2021Updated 5 years ago
- TrDesign w/ Partial Hallucination support☆10Apr 29, 2022Updated 4 years ago
- ☆37Oct 16, 2024Updated 2 years ago
- Representation learning for protein functional site analysis☆17Aug 11, 2023Updated 3 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- ☆10Jun 28, 2025Updated last year
- ☆13May 24, 2026Updated 5 months ago
- ☆18Dec 22, 2017Updated 8 years ago
- OPUS-Fold: An Open-Source Protein Folding Framework Based on Torsion-Angle Sampling☆21May 4, 2020Updated 6 years ago
- Ultra-fast in-silico structure mutation☆37Apr 9, 2025Updated last year
- A protein 3D structure prediction application☆68May 5, 2021Updated 5 years ago
- Nextflow pipeline for the computation of structure-based MSAs with AlphaFold2 models☆13Dec 20, 2022Updated 3 years ago
- Generate A3M and TGT file from a given sequence in FASTA format.☆11Nov 16, 2020Updated 5 years ago
- Solvent Accessible Surface calculation software for biomolecules.☆20Apr 23, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Tutorial files☆12Aug 7, 2024Updated 2 years ago
- Neural network model for prediction of amino-acid sequence from a protein backbone structure☆25Mar 5, 2025Updated last year
- ☆57Jan 27, 2026Updated 9 months ago
- Repository for publicly available deep learning models developed in Rosetta community☆123Sep 18, 2021Updated 5 years ago
- Trainable representation analysis study repository☆44Apr 5, 2022Updated 4 years ago
- Protein Residue-Residue Contacts from Correlated Mutations predicted quickly and accurately.☆116Nov 8, 2023Updated 2 years ago
- trRosetta for protein design☆184May 15, 2021Updated 5 years ago
- ☆145Jun 3, 2025Updated last year
- GREMLIN is a method to learn a statistical model of a protein family that captures both conservation and co-evolution patterns in the fam…☆26Jul 3, 2016Updated 10 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Identifies relevant ligands in the PDB☆10Updated this week
- Extract ligand binding sites from PDB. Match the binding sites to de novo scaffolds.☆13Dec 29, 2020Updated 5 years ago
- ☆19Oct 4, 2022Updated 4 years ago
- The Visualization of Protein-Ligand Graphs software that powers the PTGL☆16Apr 4, 2024Updated 2 years ago
- De novo protein structure prediction using iteratively predicted structural constraints☆60Jan 30, 2022Updated 4 years ago
- The standalone version of SPOT-1D-Single available for public use for research purposes.☆24May 19, 2024Updated 2 years ago
- MaveDB database web application☆13Nov 17, 2023Updated 2 years ago