Genome-wide assessment of differential translations with ribosome profiling data
☆22May 6, 2025Updated 11 months ago
Alternatives and similar repositories for xtail
Users that are interested in xtail are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- RiboDiff: Tool to detect changes in translational efficiency based on ribosome footprinting data☆24Oct 3, 2016Updated 9 years ago
- release version☆59Jul 29, 2022Updated 3 years ago
- Pipeline for Quality Control of Ribo-Seq data, selection of P-site offsets, and codon usage statistics.☆19Aug 9, 2023Updated 2 years ago
- Ribosome profiling analysis framework as described in de Klerk E., Fokkema I.F.A.C et al (2015). Alignment, triplet periodicity analysis,…☆12May 16, 2023Updated 2 years ago
- NaRnEA (Nonparametric analytical Rank-based Enrichment Analysis)☆11Mar 2, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- Riborex: Fast and flexible identification of differential translation from Ribo-seq data☆12Apr 9, 2021Updated 5 years ago
- Bullseye analysis pipeline for DART-seq analysis☆15Feb 28, 2026Updated last month
- Ribo-seq TIS Hunter, predicting translation initiation sites and ORFs using riboseq data☆51Oct 21, 2025Updated 5 months ago
- Tool for ribo-seq analysis. Most of the functionality moved to ribotricer (https://github.com/smithlabcode/ribotricer)☆13Mar 5, 2021Updated 5 years ago
- An alignment and analysis pipeline for Ribosome Profiling and RNA-seq data☆13Jul 2, 2024Updated last year
- Flexible Integration of single-cell RNA-sequencing data for large-scale Multi-tissue cell atlas datasets☆13Sep 20, 2022Updated 3 years ago
- Deconvolution of widefield microscopy images and generation of point spread functions☆59Jan 8, 2026Updated 3 months ago
- Regression-based annotation of protein-coding sequences from ribosome profiling data☆32Jul 29, 2020Updated 5 years ago
- Accurate estimation and robust modelling of translation dynamics at codon resolution☆23Jun 27, 2017Updated 8 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- Unix-based RNA-seq quantification pipeline☆10Nov 18, 2015Updated 10 years ago
- probability of mendelian error in trios.☆11Jan 27, 2016Updated 10 years ago
- Emending Alignment of Spliced Transcript Reads☆12Jan 19, 2026Updated 2 months ago
- a tool to detect differentially expressed circular RNA☆13Nov 12, 2025Updated 5 months ago
- Pipeline for the analysis of ribosome profiling, or Ribo-seq (also named ribosome footprinting) data.☆25Updated this week
- Generate HTML report for a set of genomic regions or DESeq2/edgeR results☆10Mar 31, 2026Updated last week
- HGVS variant description extractor☆11Sep 14, 2020Updated 5 years ago
- gvcf aggregation tool☆12Feb 7, 2018Updated 8 years ago
- A count based method for detecting doublets from single nucleus ATAC-seq (snATAC-seq) data.☆33Jan 3, 2023Updated 3 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Bulk RNA-seq Data Processing, Quality Control, and Downstream Analysis Pipeline☆21Jan 30, 2026Updated 2 months ago
- The Exome Coverage and Identification Report displays the coverage of every target region in your capture design. It also displays regio…☆14Apr 22, 2015Updated 10 years ago
- A distributed computing cluster-in-a-box: Mesos, zookeeper, chronos, marathon, storm + add your own. Use other physical computers to add …☆25Sep 9, 2014Updated 11 years ago
- ☆15Sep 14, 2021Updated 4 years ago
- ASimulatoR: splice-aware RNA-seq data simulation https://doi.org/10.1093/bioinformatics/btab142☆11Sep 6, 2022Updated 3 years ago
- ☆15Apr 2, 2023Updated 3 years ago
- ☆10Jan 20, 2023Updated 3 years ago
- Chromosome Scale Assembler: A high-throughput chromosome scale genome assembly pipeline for vertebrate genomes☆10Oct 16, 2024Updated last year
- Web client for CIViC: Clinical Interpretations of Variants in Cancer☆50Nov 28, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- Learning to Generate UTR Sequences for Optimized Ribosome Load and Gene Expression☆23May 11, 2025Updated 11 months ago
- A tool for Read Multi-Mapper Resolution☆24Feb 15, 2017Updated 9 years ago
- ☆21Dec 20, 2024Updated last year
- ☆12Apr 4, 2026Updated last week
- Parses and Plots Illumina SAV files☆13Jan 30, 2019Updated 7 years ago
- De novo reconstruction of cell interaction landscapes from single-cell spatial transcriptome data☆21Oct 11, 2022Updated 3 years ago
- iCAGES (integrated CAncer GEnome Score) is an effective tool for prioritizing cancer driver genes for a patient☆14Aug 18, 2022Updated 3 years ago