xryanglab / xtailLinks
Genome-wide assessment of differential translations with ribosome profiling data
☆21Updated 7 months ago
Alternatives and similar repositories for xtail
Users that are interested in xtail are comparing it to the libraries listed below
Sorting:
- ☆91Updated 5 months ago
- A modular, containerized pipeline for ATAC-seq data processing☆61Updated 3 months ago
- Analysis Workflow for Assay for Transposase-Accessible Chromatin using sequencing (ATAC-Seq)☆75Updated 2 years ago
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆42Updated 4 years ago
- Links to ATAC-seq analysis tools☆74Updated 4 years ago
- 2017_2018 single cell RNA sequencing Workshop UCD_UCB_UCSF☆36Updated 7 years ago
- tools to find circRNAs in RNA-seq data☆44Updated 8 years ago
- A quickstart tool for AmpliconArchitect. Enables all steps (alignment, CNV calling, seed interval detection) prior to running AmpliconArc…☆76Updated last week
- Estimate locus specific human LINE-1 expression.☆39Updated last month
- HMMRATAC peak caller for ATAC-seq data☆99Updated last year
- A toolkit for QC and visualization of ATAC-seq results.☆72Updated 11 months ago
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆41Updated 3 years ago
- nucleosome calling using ATAC-seq☆109Updated 5 years ago
- ☆120Updated 2 years ago
- release version☆57Updated 3 years ago
- Dynamics analysis of Alternative PolyAdenylation from RNA-seq☆63Updated 2 years ago
- CLIP-seq Analysis of Multi-mapped reads☆31Updated 4 years ago
- Tutorial Website☆61Updated 4 years ago
- Workflows for processing RNA data for germline short variant discovery with GATK v4 and related tools☆83Updated 4 years ago
- Publication quality NGS track plotting☆117Updated 2 months ago
- A Perl/R pipeline for plotting metagenes☆37Updated 4 years ago
- ATAC-seq snakemake pipeline☆88Updated 5 years ago
- Convert Counts to Fragments per Kilobase of Transcript per Million (FPKM)☆63Updated 4 years ago
- DaPars(Dynamic analysis of Alternative PolyAdenylation from RNA-seq)☆52Updated 3 years ago
- DCC uses output from the STAR read mapper to systematically detect back-splice junctions in next-generation sequencing data. DCC applies …☆37Updated 3 years ago
- A single cell RNA-seq workflow, including highly variable gene analysis, cell type assignment and differential expression analysis.☆105Updated 3 years ago
- A computational workflow for exitron splicing identification☆12Updated last year
- A set of pipelines for Hi-C and ChIP-Seq analysis.☆48Updated last year
- A toolset for profiling alternative splicing events in RNA-Seq data.☆83Updated 11 months ago
- optimization of ribosome P-site positioning in ribosome profiling data☆55Updated 10 months ago