cancerdatasci / ceresLinks
Computational correction of copy-number effect in CRISPR-Cas9 essentiality screens
☆31Updated 6 years ago
Alternatives and similar repositories for ceres
Users that are interested in ceres are comparing it to the libraries listed below
Sorting:
- deepStats: a stastitical toolbox for deeptools and genomic signals☆35Updated 4 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆31Updated last year
- ChIP-seq DC and QC Pipeline☆36Updated 4 years ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated last month
- Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.☆35Updated 2 years ago
- Explore the cancer relevance of your gene list☆52Updated 2 weeks ago
- Tumour stratification by maximum-likelihood repeated evolution from multi-region sequencing data☆66Updated 3 years ago
- Disambiguation algorithm for reads aligned to human and mouse genomes using Tophat or BWA mem☆31Updated 7 years ago
- Tools for visualizing genomics data☆69Updated 4 years ago
- ⚙️ Matching T-cell repertoire against a database of TCR antigen specificities☆39Updated 7 years ago
- Parse TF motifs from public databases, read into R, and scan using 'rtfbs'.☆23Updated 7 years ago
- GREAT Analysis - Functional Enrichment on Genomic Regions☆95Updated 2 weeks ago
- Lightweight Iterative Gene set Enrichment in R☆57Updated last year
- Wrapper R scripts for performing a weighted-gene co-expression network analysis (WGCNA)☆29Updated 10 years ago
- Reactome Pathway Analysis☆43Updated last week
- Identify cell barcodes from single-cell genomics sequencing experiments☆43Updated 4 years ago
- A toolkit for working with ATAC-seq data.☆24Updated last year
- Differential Count Data Analysis Toolbox☆61Updated last year
- Adaptive Daisy Model to discriminate core-fitness/context-specific essential genes in large scale CRISPR-Cas9 screens☆24Updated 6 years ago
- R package for reading in & working with NucleoATAC outputs☆26Updated 7 years ago
- This github repository contains code to reproduce the analysis in our paper "Variability in estimated gene expression among commonly used…☆29Updated last year
- Accessing Intra-Tumor Heterogeneity and Tracking Longitudinal and Spatial Clonal Evolutionary History by Next-Generation Sequencing.☆70Updated 4 years ago
- Locus Overlap Analysis: Enrichment of Genomic Ranges☆78Updated 5 years ago
- Tool for RNA-Seq analysis.☆39Updated 3 years ago
- processes GoT amplicon data and generates a table of metrics☆32Updated 3 years ago
- Normalization for single cell RNA-seq data☆50Updated 6 months ago
- R package for analysing proteomics data☆50Updated 2 years ago
- A hierarchical multiscale model for inferring transcription factor binding from chromatin accessibility data.☆26Updated 9 years ago
- Tutorials and code for ISMB 2019 short course on Recent Advances in Statistical Methods and Computational Algorithms for Single-Cell Omic…☆41Updated 6 years ago
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆26Updated 2 months ago