Create a cromphensive report of DEG list coming from any analysis of RNAseq data
☆30Oct 11, 2025Updated last year
Alternatives and similar repositories for DEGreport
Users that are interested in DEGreport are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- MultiQC plugin for bcbio_nextgen pipeline☆10Oct 29, 2020Updated 6 years ago
- scOntoMatch is an R package which unifies ontology annotation of scRNA-seq datasets to make them comparable across studies☆11Oct 27, 2023Updated 3 years ago
- Count ratio uncertainty modeling base linear regression☆16Sep 23, 2026Updated last month
- AnaLysis routines for ePigenomicS data - 🏫 Bioconductor project☆17Jul 7, 2023Updated 3 years ago
- ☆13Nov 13, 2018Updated 7 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Analysing Capture Seq Count Data☆14Jun 11, 2018Updated 8 years ago
- Shape analysis of high-throughput data☆19Feb 24, 2016Updated 10 years ago
- Single Cell Proteomics Data☆13Oct 2, 2026Updated last month
- ☆12Jan 3, 2017Updated 9 years ago
- Differential expression and allelic analysis, nonparametric statistics☆33Oct 1, 2026Updated last month
- ☆17Jan 6, 2025Updated last year
- Local Spatial Gradient Inference☆12Jul 28, 2025Updated last year
- 🧬 o r t h o g e n e 🧬✨✨✨✨✨✨✨ Interspecies gene mapping✨✨✨✨✨ 🦠 🔁 🌱 🔁 🌳 🔁 🍎 🔁 🍊 🔁 🪱 🔁 🪰 🔁 🐟 🔁 🦎 🔁 🐓 🔁 🦇 🔁 🐄 🔁 �…☆58Apr 29, 2026Updated 6 months ago
- Transcript quantification import with automatic metadata detection☆72Oct 25, 2026Updated last week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Bioconductor package that makes BIG data pint-sized.☆21Feb 12, 2024Updated 2 years ago
- Code for the TAURUS study☆13Oct 24, 2024Updated 2 years ago
- clustering method for single-cell transcriptomics data☆11Oct 11, 2026Updated 3 weeks ago
- STcompare is an R package for comparing spatial gene expression patterns across spatial transcriptomics (ST) datasets☆14Oct 19, 2026Updated 2 weeks ago
- K-means clustering for large single-cell datasets☆13Feb 10, 2026Updated 8 months ago
- Cell type-specific SVG detection☆10Jan 28, 2026Updated 9 months ago
- Program to run the SOWH test (likelihood-based test used to compare tree topologies which are not specified a priori)☆11May 3, 2024Updated 2 years ago
- RNAseq pipeline for alternative splicing junctions☆15Mar 26, 2026Updated 7 months ago
- R package: ConDecon is a clustering-independent deconvolution method for estimating cell abundances in bulk tissues using single-cell RNA…☆14Oct 17, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Evaluating spatially variable gene detection methods for spatial transcriptomics data☆11Jun 8, 2026Updated 4 months ago
- A repository for benchmarking spatial deconvolution and mapping tools☆39May 13, 2025Updated last year
- Detecting Aberrant Splicing Events from RNA-sequencing data☆17Dec 10, 2024Updated last year
- Improved multi-sample transcript abundance estimates using adaptive priors☆20Oct 29, 2018Updated 8 years ago
- A suite of javascript apps for visualizing sequencing data☆12Nov 18, 2013Updated 12 years ago
- Tools for visualizing genomics data☆72Oct 26, 2021Updated 5 years ago
- scType goes spatial: ScType enables fast and accurate cell type identification from spatial transcriptomics data☆12Jul 11, 2024Updated 2 years ago
- Tools for the analysis of heterogeneous tissues☆15Aug 24, 2022Updated 4 years ago
- ☆10Mar 12, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Associate pathways + gene ontologies with significant genes.☆10Jun 5, 2023Updated 3 years ago
- Modular package for generation of sets of ranges representing the null hypothesis. These can take the form of bootstrapped ranges (bootRa…☆29Aug 20, 2026Updated 2 months ago
- Quantify and interpret divers of variation in multilevel gene expression experiments☆88Jul 30, 2026Updated 3 months ago
- Helper Functions for LIBD Deconvolution☆11Sep 25, 2026Updated last month
- Hierarchical annotation of immune cells n scRNA-Seq data based on ssGSEA algorithm.☆12May 31, 2024Updated 2 years ago
- Spatial Omics Structure Analysis (sosta)☆10Sep 18, 2026Updated last month
- A computational framework for bulk RNA-seq deconvolution☆11Dec 3, 2024Updated last year