Alternatives and similar repositories for phantasus:

Users that are interested in phantasus are comparing it to the libraries listed below

• stephenturner / mergelanes
  Merge fastq files split over lanes
  ☆20Updated 7 years ago
• snystrom / memes
  An R interface to the MEME Suite
  ☆50Updated 5 months ago
• ucdavis-bioinformatics-training / 2017_2018-single-cell-RNA-sequencing-Workshop-UCD_UCB_UCSF
  2017_2018 single cell RNA sequencing Workshop UCD_UCB_UCSF
  ☆36Updated 6 years ago
• Novartis / easyTrackHubs
  This package provides a function to reformat lists of genome coverage files, such as bigWig of bam files, into the directory structure of…
  ☆28Updated 10 months ago
• NBISweden / workshop-RNAseq
  Workshop • Analysis of RNA-seq data
  ☆35Updated last year
• saketkc / rna-seq-snakemake
  Snakemake based pipeline for RNA-Seq analysis
  ☆31Updated 5 years ago
• thelovelab / tximeta
  Transcript quantification import with automatic metadata detection
  ☆67Updated last month
• vivekbhr / Subread_to_DEXSeq
  Scripts to import your FeatureCounts output into DEXSeq
  ☆33Updated 6 years ago
• nuno-agostinho / psichomics
  Interactive R package to quantify, analyse and visualise alternative splicing
  ☆36Updated this week
• ssayols / rrvgo
  Reduce + Visualize Gene Ontology
  ☆26Updated 4 months ago
• NBISweden / workshop-epigenomics-RTDs
  workshop website on readthedocs
  ☆19Updated last month
• drpowell / degust
  An interactive web-tool for RNA-seq analysis
  ☆68Updated last month
• nf-core / rnasplice
  rnasplice is a bioinformatics pipeline for RNA-seq alternative splicing analysis
  ☆52Updated 2 months ago
• uc-bd2k / GREIN
  GREIN : GEO RNA-seq Experiments Interactive Navigator
  ☆49Updated 5 years ago
• luciorq / isoformic
  Isoform-level functional RNA-Seq analysis 🧬
  ☆22Updated 3 months ago
• montilab / hypeR
  An R Package for Geneset Enrichment Workflows
  ☆76Updated last week
• ebi-gene-expression-group / r-seurat-scripts
  Scripts to install as a Bioconda package for making workflows
  ☆18Updated 6 months ago
• ratschlab / pancanatlas_code_public
  Public repository containing research code for the TCGA PanCanAtlas Splicing project
  ☆41Updated 4 years ago
• JEFworks / liger
  Lightweight Iterative Gene set Enrichment in R
  ☆57Updated 5 months ago
• rnabioco / djvdj
  An R package to analyze single-cell V(D)J data
  ☆24Updated last year
• simonvh / bioinfosummer
  Tutorial for AMSI BioInfoSummer 2018
  ☆29Updated 6 years ago
• PhanstielLab / bedtoolsr
  R package wrapping bedtools
  ☆38Updated last week
• williamritchie / IRFinder
  Detecting intron retention from RNA-Seq experiments
  ☆55Updated 8 months ago
• pachterlab / kallisto-transcriptome-indices
  Reference transcriptome indices build from kallisto for popular organisms
  ☆42Updated last year
• hbctraining / main
  ☆53Updated this week
• bioinformatics-core-shared-training / cruk-summer-school-2018
  Summer school course materials collection
  ☆25Updated 6 years ago
• maxplanck-ie / 10X_snakepipe
  A snakemake pipeline for 10X genomics cellranger
  ☆20Updated 3 months ago
• bartongroup / Proteus
  R package for analysing proteomics data
  ☆49Updated last year
• ConesaLab / MultiPower
  Statistical power studies for multi-omics experiments.
  ☆31Updated 2 months ago
• mani2012 / BatchQC
  Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.
  ☆35Updated last year