openvax / isovar
Assembly of RNA reads to determine the effect of a cancer mutation on protein sequence
☆25Updated 7 months ago
Alternatives and similar repositories for isovar:
Users that are interested in isovar are comparing it to the libraries listed below
- Disambiguation algorithm for reads aligned to human and mouse genomes using Tophat or BWA mem☆31Updated 6 years ago
- R package to analyze aberrant splicing junctions in tumor samples to identify neoepitopes☆14Updated 3 weeks ago
- ImReP is a computational method for rapid and accurate profiling of the adaptive immune repertoire from regular RNA-Seq data.☆28Updated 5 years ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- Filters for false-positive mutation calls in NGS☆30Updated 6 years ago
- Filtering of PDX samples for mouse derived reads