singleron-RD / CeleScopeLinks
Single Cell Analysis Pipelines
☆116Updated last week
Alternatives and similar repositories for CeleScope
Users that are interested in CeleScope are comparing it to the libraries listed below
Sorting:
- Analysis pipeline for ATAC-seq data☆85Updated 2 years ago
- SCSA: cell type annotation for single-cell RNA-seq data☆94Updated 2 years ago
- The official pipeline for flexible and high-performance analysis of DNBelab C Serie single-cell data.☆134Updated 3 weeks ago
- ☆121Updated 5 months ago
- Cell types enrichment analysis☆207Updated last year
- A Systematic and Dynamic Pipeline for Single-Cell RNA Sequencing Analysis☆111Updated 2 years ago
- CUT&RUN and CUT&Tag data processing and analysis☆113Updated 11 months ago
- ☆101Updated 4 months ago
- ☆90Updated 5 months ago
- Basic workflow for ATAC-seq analysis☆92Updated last year
- A tool for detecting somatic variants in single cell data☆216Updated last year
- Accompanying code for the tutorial: Annotating single cell transcriptomic maps using automated and manual methods☆99Updated 2 years ago
- This is the repository that contains the analysis of the lung adenocarcinoma single cell dataset☆154Updated 5 years ago
- wrapper scripts for convenient STARsolo processing of 10X and other scRNA-seq☆76Updated 8 months ago
- collected resource for scRNA-seq analysis☆67Updated 2 years ago
- dandelion - A single cell BCR/TCR V(D)J-seq analysis package☆124Updated this week
- ☆184Updated last year
- scDIOR: Single cell data IO softwaRe☆153Updated 3 years ago
- Efficient genotyping bi-allelic SNPs on single cells☆157Updated 3 months ago
- my notes for scATACseq analysis☆133Updated last year
- Tools for single-cell data processing☆132Updated last year
- ☆88Updated last year
- ☆203Updated 2 months ago
- Convert Seurat objects to 10x Genomics Loupe files.☆148Updated last week
- R package that automatically classifies the cells in the scRNA data by segregating non-malignant cells of tumor microenviroment from the …☆121Updated 2 months ago
- Analysis pipeline for ATAC-seq Data☆62Updated 4 years ago
- Cell type specific enhancer-gene predictions using ABC model (Fulco, Nasser et al, Nature Genetics 2019)☆246Updated last week
- Multi-omics analysis protocols by Lyu.☆53Updated 2 years ago
- EcoTyper is a machine learning framework for large-scale identification of cell states and cellular ecosystems from gene expression data.☆230Updated last year
- AUCell: score single cells with gene regulatory networks☆183Updated last year