Variational Inference of Polygenic Risk Scores
☆31Apr 22, 2025Updated last year
Alternatives and similar repositories for viprs
Users that are interested in viprs are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Implemention of Accurate estimation of SNP-heritability from biobank-scale data irrespective of genetic architecture. (Nature Genetics 20…☆15Sep 5, 2019Updated 6 years ago
- R package for 'Bayesian multivariate analysis of summary statistics' (Stephens Lab)☆10Sep 17, 2020Updated 5 years ago
- R package for two-sample Mendelian randomization using the robust adjusted profile score☆42Oct 31, 2025Updated 6 months ago
- Documentation on new GWAS Summary Statistics Standard☆24Nov 19, 2025Updated 6 months ago
- ☆11Apr 5, 2024Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A fine-mapping method integrating GWAS summary statistics and functional annotation data☆11Dec 28, 2023Updated 2 years ago
- Miscellaneous genomics tools and data structures☆15Jul 26, 2024Updated last year
- GWAS genetics Fine-mapping method☆18May 17, 2024Updated 2 years ago
- Applying polygenic scores (PGS) on imputed genotypes☆35Oct 28, 2025Updated 6 months ago
- GridLMM package☆39Oct 16, 2025Updated 7 months ago
- Simulate GWAS data from an arbitrary DAG☆11May 18, 2026Updated last week
- Modeling and Analysis of (Statistical) Genetics data in python☆18May 19, 2026Updated last week
- Fine-tuning polygenic risk score models using GWAS summary statistics☆54Oct 19, 2025Updated 7 months ago
- Heritability, genetic correlation and functional enrichment estimation for case-control studies☆20Nov 26, 2023Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- RSparsePro for robust fine-mapping in the presence of LD mismatch☆15Nov 4, 2024Updated last year
- Python module to read binary Plink files.☆17Mar 25, 2026Updated 2 months ago
- A list of awesome tools for complex trait genetics.☆86Jan 28, 2025Updated last year
- ☆24Jun 30, 2023Updated 2 years ago
- causal TWAS (cTWAS)☆51May 7, 2026Updated 2 weeks ago
- bumphunter☆18Mar 19, 2024Updated 2 years ago
- Fast and Efficient Tool to Simulate Summary Statistics from Genome-Wide Association Studies☆12May 21, 2024Updated 2 years ago
- ldshrink: a one-stop R package for shrinkage estimation of linkage disequilibrium☆13Mar 31, 2021Updated 5 years ago
- SMTpred is a program which combines SNP effects or individual scores from multiple traits according to their sample size, SNP-heritabilit…☆15May 25, 2017Updated 9 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- A multi-ancestry polygenic risk score approach☆21Jul 20, 2024Updated last year
- Zotero integration for Obsidian in Neovim☆19Aug 21, 2025Updated 9 months ago
- Data and code for the Effector index☆14Oct 13, 2020Updated 5 years ago
- R package to perform two-sample Mendelian Randomisation (MR) analyses using (potentially) overlapping samples☆68Jan 9, 2025Updated last year
- R package to estimate kinship and FST from SNP data☆21Jan 27, 2026Updated 3 months ago
- user-friendly pipeline for GWAS fine-mapping☆14Mar 9, 2025Updated last year
- PaNeV: an R package for a pathway-based network visualization☆10Aug 25, 2025Updated 9 months ago
- RSS: Regression with Summary Statistics☆51Sep 16, 2024Updated last year
- PRS pipeline using PRS_CS☆15May 19, 2026Updated last week
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Analysis package for processing counts from genome-wide CRISPR/Cas9 screens☆16Feb 19, 2021Updated 5 years ago
- QTL Discovery using Annotations☆29Dec 12, 2022Updated 3 years ago
- Wrappers for easier generative biology workflows☆21Sep 17, 2025Updated 8 months ago
- A matrix-like wrapper around PLINK .bed files☆19Sep 6, 2024Updated last year
- Documentation for MoBa Genetics data release☆12Jan 17, 2022Updated 4 years ago
- An R package for Poisson multivariate adaptive shrinkage.☆11Apr 15, 2024Updated 2 years ago
- GWAS for survival analysis in large cohorts☆22Jul 24, 2024Updated last year