Alternatives and similar repositories for popkin

Users that are interested in popkin are comparing it to the libraries listed below

• stephenslab / effective-computing
  Effective Computing—Resources for Computational Biologists
  ☆26Updated 5 years ago
• NovembreLab / PCAviz
  An R package to help in plotting PCA results nicely.
  ☆13Updated 5 years ago
• vsbuffalo / msr
  Process MS results in R, in a tidy way
  ☆16Updated 7 years ago
• gjuggler / ggphylo
  Phylogenetic plots for R and ggplot
  ☆27Updated 12 years ago
• rqtl / qtl2data
  Example data for R/qtl2
  ☆12Updated 4 years ago
• grunwaldlab / poppr
  🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction
  ☆71Updated last week
• pfh / topconfects
  TOP results by CONfident efFECT Sizes.
  ☆14Updated 9 months ago
• mturchin20 / bmass
  R package for 'Bayesian multivariate analysis of summary statistics' (Stephens Lab)
  ☆10Updated 5 years ago
• rqtl / qtl2
  QTL analysis software for high-dimensional data and complex cross designs
  ☆34Updated 3 months ago
• vsbuffalo / gplyr
  ☆18Updated 8 years ago
• devillemereuil / QGglmm
  Compute various quantitative genetics parameters from a Generalised Linear Mixed Model (GLMM) estimates. Especially, it yields the observ…
  ☆16Updated 7 months ago
• jokergoo / gtrellis
  Genomic plot in trellis layout
  ☆41Updated last year
• alexkychen / assignPOP
  Population Assignment using Genetic, Non-genetic or Integrated Data in a Machine-learning Framework. Methods in Ecology and Evolution.…
  ☆16Updated this week
• liamrevell / learnPopGen
  initial commit
  ☆26Updated 2 years ago
• gladkia / igvR
  An R Bioconductor package providing interactive connections to igv.js (the Integrative Genomics Viewer) in a web browser
  ☆46Updated 10 months ago
• mathii / europe_selection
  Analysis scripts from the paper "Eight thousand years of natural selection in Europe".
  ☆10Updated 9 years ago
• ChrisLou-bioinfo / gg.gap
  Easy to define segments in y-axis for 'ggplot2'.
  ☆27Updated 5 years ago
• kassambara / fastqcr
  fastqcr: Quality Control of Sequencing Data
  ☆74Updated 2 years ago
• thierrygosselin / radiator
  RADseq Data Exploration, Manipulation and Visualization using R
  ☆59Updated 2 weeks ago
• ngs-docs / 2015-nov-adv-rna
  ☆18Updated 9 years ago
• cheuerde / cpgen
  Parallel Genomic evaluations in R
  ☆17Updated 11 months ago
• kkdey / Logolas
  R package for Enrichment Depletion Logos (EDLogos) and String Logos
  ☆27Updated 6 years ago
• statgenlmu / coala
  A Framework for Coalescent Simulation in R
  ☆23Updated last year
• DudbridgeLab / avengeme
  Statistical properties of polygenic risk scores
  ☆19Updated 5 years ago
• syntheke / bayesR
  Bayesian hierarchical model for complex trait analysis
  ☆44Updated last year
• j-a-thia / genomalicious
  A smorgasbord of R functions for performing and teaching population genomic analyses
  ☆19Updated last week
• QTCAT / qtcat
  Quantitative Trait Cluster Association Test in R
  ☆25Updated 4 years ago
• const-ae / tidygenomics
  Tidy Verbs for Dealing with Genomic Data Frames https://const-ae.github.io/tidygenomics/
  ☆104Updated 4 years ago
• gosling-lang / grosling
  R interface to 'Gos'
  ☆39Updated 2 years ago
• cooplab / Popgen_teaching_code
  ☆52Updated 3 years ago