Alternatives and similar repositories for popkin

Users that are interested in popkin are comparing it to the libraries listed below

• stephenslab / effective-computing
  Effective Computing—Resources for Computational Biologists
  ☆26Updated 5 years ago
• NovembreLab / PCAviz
  An R package to help in plotting PCA results nicely.
  ☆13Updated 5 years ago
• vsbuffalo / msr
  Process MS results in R, in a tidy way
  ☆17Updated 7 years ago
• gjuggler / ggphylo
  Phylogenetic plots for R and ggplot
  ☆27Updated 12 years ago
• vsbuffalo / gplyr
  ☆18Updated 8 years ago
• kassambara / fastqcr
  fastqcr: Quality Control of Sequencing Data
  ☆73Updated last year
• rqtl / qtl2data
  Example data for R/qtl2
  ☆12Updated 3 years ago
• devillemereuil / QGglmm
  Compute various quantitative genetics parameters from a Generalised Linear Mixed Model (GLMM) estimates. Especially, it yields the observ…
  ☆16Updated 5 months ago
• pfh / topconfects
  TOP results by CONfident efFECT Sizes.
  ☆14Updated 7 months ago
• gosling-lang / grosling
  R interface to 'Gos'
  ☆39Updated 2 years ago
• tbradley1013 / tree-subset-shiny
  This repo contains the code for a shiny app that allows for visualization of subset phylogenetic trees
  ☆15Updated 6 years ago
• ChrisLou-bioinfo / gg.gap
  Easy to define segments in y-axis for 'ggplot2'.
  ☆28Updated 5 years ago
• ngs-docs / 2015-nov-adv-rna
  ☆18Updated 9 years ago
• grunwaldlab / poppr
  🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction
  ☆71Updated 3 weeks ago
• mathii / europe_selection
  Analysis scripts from the paper "Eight thousand years of natural selection in Europe".
  ☆10Updated 9 years ago
• alfonsosaera / myManhattan
  R function to generate Manhattan plots using ggplot
  ☆9Updated 5 years ago
• jokergoo / gtrellis
  Genomic plot in trellis layout
  ☆40Updated last year
• gladkia / igvR
  An R Bioconductor package providing interactive connections to igv.js (the Integrative Genomics Viewer) in a web browser
  ☆46Updated 8 months ago
• const-ae / tidygenomics
  Tidy Verbs for Dealing with Genomic Data Frames https://const-ae.github.io/tidygenomics/
  ☆104Updated 4 years ago
• markrobinsonuzh / TreeSummarizedExperiment
  An extension class of SummarizedExperiment to allow hierarchical structure on the row or column dimension
  ☆14Updated 3 months ago
• statgenlmu / coala
  A Framework for Coalescent Simulation in R
  ☆23Updated last year
• OchoaLab / genio
  Statistical GENetics Input/Output Functions
  ☆18Updated 4 months ago
• syntheke / bayesR
  Bayesian hierarchical model for complex trait analysis
  ☆44Updated last year
• Gregor-Mendel-Institute / mlmm
  An efficient multi-locus mixed-model approach for genome-wide association studies in structured populations
  ☆16Updated 7 years ago
• rqtl / qtl2
  QTL analysis software for high-dimensional data and complex cross designs
  ☆34Updated last month
• MonashBioinformaticsPlatform / varistran
  R package providing Variance Stabilizing Transformations appropriate for RNA-Seq data
  ☆21Updated last month
• gogleva / SecretSanta
  flexible pipelines for scalable secretome prediction, R package
  ☆12Updated 6 years ago
• laurabenestan / RDA_outlier
  Redundancy Analysis allowing to both estimate the percent of genomic variation explained by each variable as well as to detect the putati…
  ☆8Updated 5 years ago
• variani / lme4qtl
  Mixed models @lme4 + custom covariances + parameter constraints
  ☆53Updated 4 years ago
• kkdey / Logolas
  R package for Enrichment Depletion Logos (EDLogos) and String Logos
  ☆27Updated 6 years ago