rafalab / bumphunterLinks
bumphunter
☆18Updated last year
Alternatives and similar repositories for bumphunter
Users that are interested in bumphunter are comparing it to the libraries listed below
Sorting:
- R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/☆41Updated last year
- Bioconductor package for management of multi-assay data☆74Updated 2 months ago
- DESeq2 or edgeR☆22Updated 9 years ago
- Glimma R package☆50Updated last year
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆44Updated 2 months ago
- Devel repository for minfi☆64Updated last year
- An introduction to matrix factorization and PCA and SVD.☆41Updated 2 years ago
- An R package for multivariate adaptive shrinkage.☆91Updated last year
- Functional enrichment analysis of high-throughput omics data☆20Updated last year
- Explore design matrices interactively with R/Shiny☆38Updated 2 months ago
- Reactome Pathway Analysis☆43Updated 3 weeks ago
- pcaExplorer - Interactive exploration of Principal Components of Samples and Genes in RNA-seq data☆56Updated last month
- Clone of the Bioconductor repository for the basilisk package.☆29Updated 2 months ago
- Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap☆26Updated 5 years ago
- Annotation-agnostic differential expression analysis of RNA-seq data via expressed regions-level or single base-level approaches☆44Updated last year
- The official repository of the Bioconductor 2019 Conference Workshops☆24Updated 2 years ago
- Representation and manipulation of genomic intervals☆46Updated last month
- A container (S4 class) for matrix-like assays☆36Updated 2 months ago
- Integrate the cancer genomics portal, cBioPortal, using MultiAssayExperiment☆33Updated 2 months ago
- fastqcr: Quality Control of Sequencing Data☆76Updated 2 years ago
- An htmlwidget version of igv, for RStudio and Shiny apps☆38Updated 4 months ago
- Visualize Cytometry data with ggplot2☆63Updated 2 weeks ago
- Download, integration and visualizations of the variety & volume of TCGA data.☆51Updated 3 years ago
- A R package for Grade of Membership model and Visualization of counts data:☆32Updated 5 years ago
- Project Website:☆54Updated 2 weeks ago
- Introduction to the Bioconductor project☆19Updated 3 months ago
- An R Bioconductor package providing interactive connections to igv.js (the Integrative Genomics Viewer) in a web browser☆45Updated last month
- R package for extracting mutation signatures from a list of somatic mutations☆37Updated 6 years ago
- Assorted thoughts, explanations and justifications for code in the scran package and the simpleSingleCell workflow.☆47Updated 4 months ago
- An online companion to the OSCA manuscript demonstrating Bioconductor resources and workflows for single-cell RNA-seq analysis.☆37Updated 2 years ago