bumphunter
☆18Mar 19, 2024Updated last year
Alternatives and similar repositories for bumphunter
Users that are interested in bumphunter are comparing it to the libraries listed below
Sorting:
- Website and blog for the research group of Mark J. van der Laan☆11Jul 1, 2021Updated 4 years ago
- ☆12Feb 6, 2024Updated 2 years ago
- Devel repository for minfi☆63Apr 30, 2024Updated last year
- R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/☆41Dec 12, 2024Updated last year
- [Under development] Random classification and regression trees☆17Oct 11, 2015Updated 10 years ago
- Variational Inference of Polygenic Risk Scores☆28Apr 22, 2025Updated 10 months ago
- R package for Inference of differentially methylated regions (DMRs) from bisulfite sequencing☆62May 9, 2025Updated 9 months ago
- ☆26Sep 23, 2025Updated 5 months ago
- Materials for Module 3 of the SISBID Workshop, Reproducible Research☆63Jul 19, 2017Updated 8 years ago
- knitr in a nutshell: a brief guide to knitr☆31Aug 12, 2024Updated last year
- bedford lab research☆68Updated this week
- A collection of resources to filter 'bad' probes from the Illumina 450k and EPIC methylation arrays☆29Dec 5, 2023Updated 2 years ago
- An R package implementing Large-Scale Evidence Generation and Evaluation in a Network of Databases (LEGEND).☆10Dec 18, 2020Updated 5 years ago
- Differential expression (DE); gene set Enrichment Analysis (GSEA); single cell RNAseq studies (scRNAseq)☆34Oct 6, 2022Updated 3 years ago
- Elastic, reproducible, and reusable genomic data science tools from R backed by cloud resources☆34Oct 27, 2021Updated 4 years ago
- This repository contains my slides and references for a presentation to the UW eScience Institute on using Docker for reproducible resear…☆10Feb 11, 2015Updated 11 years ago
- Submission for CS50x online course by Harvard University☆11Aug 7, 2014Updated 11 years ago
- An R package for performing cell typing in SMI and other single cell data☆48May 19, 2025Updated 9 months ago
- combining p-values using modified stouffer-liptak for spatially correlated results (probes)☆46Mar 18, 2022Updated 3 years ago
- Annotation-agnostic differential expression analysis of RNA-seq data via expressed regions-level or single base-level approaches☆44Dec 13, 2024Updated last year
- ☆16Jun 9, 2025Updated 8 months ago
- R functions for automation of biomarker discovery based on processing downstream of large LC-MS datasets from any peak picking software☆10May 17, 2017Updated 8 years ago
- ☆14Mar 26, 2024Updated last year
- Explore design matrices interactively with R/Shiny☆38Oct 29, 2025Updated 4 months ago
- ☆11Feb 3, 2026Updated last month
- Personalized Network-based Anti-Cancer Therapy Appointment☆10Dec 22, 2025Updated 2 months ago
- Implementation of LTFH++☆11Nov 17, 2025Updated 3 months ago
- An R package for interfacing with a WebAPI instance☆10Sep 5, 2025Updated 6 months ago
- The R/Python scripts for the analysis of single-cell RNA-seq data from COVID-19 patients☆10Dec 16, 2020Updated 5 years ago
- Data Standards Hackathon for NGS based typing.☆14Feb 2, 2026Updated last month
- A fine-mapping method integrating GWAS summary statistics and functional annotation data☆11Dec 28, 2023Updated 2 years ago
- Documentation for MoBa Genetics data release☆11Jan 17, 2022Updated 4 years ago
- ☆10Mar 7, 2023Updated 2 years ago
- SQLAlchemy models and DDL and ERD generation from chop-dbhi/data-models style JSON endpoints.☆11May 22, 2023Updated 2 years ago
- R package for nonparametric estimation of counterfactual survival functions and survival contrasts from right-censored data with an obser…☆13Jul 7, 2023Updated 2 years ago
- OSS2017 - Open Science for Synthesis: Gulf Research Program☆10May 12, 2019Updated 6 years ago
- Kinase-Substrate Enrichment Analysis (KSEA) App☆10May 2, 2017Updated 8 years ago
- An R package for climate data post-processing (part of the climate4R bundle)☆12Jan 21, 2026Updated last month
- R package for DNA methylation analysis☆250Jan 18, 2026Updated last month