zhwm / SparseProLinks
A fine-mapping method integrating GWAS summary statistics and functional annotation data
☆10Updated last year
Alternatives and similar repositories for SparsePro
Users that are interested in SparsePro are comparing it to the libraries listed below
Sorting:
- A method for analyzing scATAC-seq experiments.☆31Updated last week
- causal TWAS (cTWAS)☆43Updated this week
- ☆13Updated 2 years ago
- List of software packages for multi-trait / multiple-trait / multivariate / high-dimensional GWAS☆31Updated 2 months ago
- Data and code for the Effector index☆13Updated 4 years ago
- ☆33Updated last year
- Valid and Powerful Machine-Learning-Assisted Genetic Association Studies☆21Updated last month
- Refining the impact of genetic evidence on clinical success☆25Updated 11 months ago
- GWAS gold standards repository☆34Updated last year
- QTL Discovery using Annotations☆25Updated 2 years ago
- Mediated Expression Score Regression (MESC)☆26Updated 3 years ago
- A Package for Cas9-Enabled Single Cell Lineage Tracing Tree Reconstruction☆89Updated last month
- ☆22Updated last year
- CHISEL -- Copy-number Haplotype Inference in Single-cell by Evolutionary Links☆40Updated 7 months ago
- CREsted is a Python package for training sequence-based deep learning models on scATAC-seq data, for capturing enhancer code and for desi…☆40Updated last week
- Code for creating cell-type-specific regulatory element annotation files☆18Updated last year
- Suite of heritability and genetic correlation estimation tools for exome-sequencing data☆34Updated 4 months ago
- RaMWAS: Fast Methylome-Wide Association Study Pipeline for Enrichment Platforms☆10Updated 3 years ago
- An end-to-end computational pipeline for large Perturb-seq screens☆13Updated 2 months ago
- Fast, integrative fine mapping with functional data☆59Updated 5 years ago
- A faster and angrier package for EBMF.☆12Updated 5 months ago
- Code and simulations using biologically annotated neural networks☆21Updated 3 years ago
- Gene Set + S2G strategy annotations analyzed for disease architecture☆51Updated 2 years ago
- This is the code release for paper Continuous State HMMs for Modeling Time Series Single Cell RNA-Seq Data☆22Updated 7 years ago
- Modeling and Analysis of (Statistical) Genetics data in python☆16Updated 2 weeks ago
- Brain-related -omics data☆26Updated 11 months ago
- Robust Allele Specific Quantification and quality controL☆39Updated 3 years ago
- Toolkit for analyzing genetics data from admixed populations☆25Updated 4 months ago
- An R package to construct Elastic Principal Graphs☆23Updated 5 years ago
- ☆48Updated last month