WenjianBI / SPACox
GWAS for survival analysis in large cohorts
☆18Updated last month
Related projects: ⓘ
- Hypothesis Prioritisation in multi-trait Colocalization☆46Updated 5 months ago
- topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…☆44Updated 2 months ago
- PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank☆17Updated 2 years ago
- ☆32Updated 3 years ago
- Regional association plots☆25Updated 5 months ago
- Harmonise GWAS summary statistics against a reference VCF☆38Updated 3 years ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆39Updated 6 years ago
- Pair-wise conditional analysis and colocalisation☆36Updated 4 months ago
- FOCUS: Fine-mapping Of CaUsal gene Sets☆43Updated last year
- Analyses conducting GWAS across the UKBB diverse superpopulations☆45Updated 2 months ago
- Code repository for Pietzner M, Wheeler E, et al. 2021 "Mapping the proteo-genomic convergence of human diseases"☆23Updated 3 years ago
- R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data☆40Updated 3 years ago
- Code for GBMI trans-ancestry proteome Mendelian randomization satellite paper☆17Updated 8 months ago
- A collection of various utilities for GWAS summary statistics☆26Updated 4 months ago
- ☆19Updated last year
- corrplot of LDSC genetic correlation results☆44Updated 2 years ago
- An R package for creating mirrored Manhattan plots☆17Updated last year
- Genetics ToolboX R package☆30Updated 4 years ago
- LDlinkR☆53Updated 5 months ago
- harmonization, liftover, and imputation of summary statistics from GWAS☆31Updated 4 years ago
- Statistical fine-mapping pipeline in FinnGen☆24Updated last week
- MA-FOCUS: Multi-Ancestry Fine-mapping Of CaUsal gene Sets☆23Updated 4 months ago
- Code for implementing Mendelian randomization investigations☆14Updated 8 years ago
- A statistical test of pleiotropic effect of a genetic variant on two traits using GWAS summary statistics☆24Updated 2 years ago
- R package for investigating clustered heterogeneity in Mendelian randomization (MR) analyses.☆11Updated 2 years ago
- Create a PheWAS code based phenome using ICD9 and ICD10 data from baskets of the UK biobank☆23Updated 11 months ago
- Genotype-based Prediction (GenoPred)☆63Updated last week
- Code supporting analyses in paper on fine-mapping AD loci☆15Updated 3 years ago
- Partners Biobank genomics data QC☆23Updated 4 years ago
- A principled framework to estimate annotation-stratified genetic covariance using GWAS summary statistics.☆23Updated 3 months ago