Alternatives and similar repositories for GWASBrewer

Users that are interested in GWASBrewer are comparing it to the libraries listed below

• andywdahl / rgwas
  Learn and validate subtypes from multiple traits
  ☆20Updated 4 years ago
• baolinwu / MTAR
  Various multi-trait association tests in R
  ☆11Updated 7 years ago
• lcpilling / ukbrapR
  R package for working in the UK Biobank Research Analysis Platform (RAP)
  ☆68Updated 3 months ago
• NightingaleHealth / ggforestplot
  An R package to create forestplots of measures of effects with their confidence intervals.
  ☆64Updated 4 years ago
• variani / lme4qtl
  Mixed models @lme4 + custom covariances + parameter constraints
  ☆53Updated 4 years ago
• OchoaLab / genio
  Statistical GENetics Input/Output Functions
  ☆18Updated 8 months ago
• tshmak / lassosum
  LASSO for GWAS with summary statistics
  ☆78Updated 5 years ago
• Bioconductor / BioC2020
  BioC2020: Where Software and Biology Connect
  ☆12Updated 2 years ago
• lukejoconnor / LCV
  Software implementing the Latent Causal Variable Model
  ☆64Updated 5 years ago
• maialab / quincunx
  quincunx: an R package to query, download and wrangle PGS Catalog data
  ☆14Updated 3 years ago
• stephenslab / mashr
  An R package for multivariate adaptive shrinkage.
  ☆92Updated 11 months ago
• tye27 / mr.divw
  Debiased Inverse-Variance Weighted Estimator in Two-Sample Summary-Data Mendelian Randomization
  ☆10Updated last year
• ramiromagno / gwasrapidd
  gwasrapidd: an R package to query, download and wrangle GWAS Catalog data
  ☆99Updated 5 months ago
• Stahl-Lab-MSSM / coloc2
  Upgrade to coloc
  ☆13Updated 7 years ago
• MRCIEU / GeneHackman
  Pipeline for genetic epidemiology projects at Univsersity of Bristol
  ☆15Updated 8 months ago
• NCBI-Hackathons / MR_BACOn
  Mendelian Randomization with Biomarker Associations for Causality with Outcomes
  ☆25Updated 6 years ago
• mancusolab / sushie
  Software to perform multi-ancestry SNP fine-mapping on molecular data
  ☆27Updated 2 months ago
• RajLabMSSM / catalogueR
  Easy-to-use R wrappers for the eQTL Catalogue's API (both with tabix and the REST API).
  ☆14Updated 2 years ago
• lcrawlab / i-LDSC
  Code and simulations using interaction-LD score regression
  ☆13Updated last year
• lcolladotor / biocthis
  Automate package and project setup for Bioconductor packages
  ☆54Updated 7 months ago
• MRCIEU / genetics.binaRies
  Binaries for tools used in genetics in an R package
  ☆11Updated 6 months ago
• explodecomputer / tryx
  ☆10Updated 5 years ago
• QuantGen / BEDMatrix
  A matrix-like wrapper around PLINK .bed files
  ☆19Updated last year
• stephenslab / ldshrink
  ldshrink: a one-stop R package for shrinkage estimation of linkage disequilibrium
  ☆13Updated 4 years ago
• gusevlab / hsq_ancestry_examples
  Toy simulations and analyses of heritability and genetic differences
  ☆11Updated last year
• RayDebashree / metaUSAT
  metaUSAT is a data-adaptive statistical approach for testing genetic associations of multiple traits from single/multiple studies using u…
  ☆20Updated 4 years ago
• ropensci / rsnps
  Wrapper to a number of SNP web APIs
  ☆55Updated last year
• CBIIT / LDlinkR
  LDlinkR
  ☆61Updated last year
• LizaDarrous / lhcMR
  lhcMR
  ☆26Updated last year
• stephenslab / fastTopics
  Fast algorithms for fitting topic models and non-negative matrix factorizations to count data.
  ☆83Updated last week