DeepGraphLearning / GearBindLinks
Pretrainable geometric graph neural network for antibody affinity maturation
☆61Updated 6 months ago
Alternatives and similar repositories for GearBind
Users that are interested in GearBind are comparing it to the libraries listed below
Sorting:
- Antibody-specific masked language model☆60Updated 2 years ago
- Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)☆43Updated 9 months ago
- ☆86Updated 3 years ago
- ☆116Updated 3 months ago
- ☆72Updated 5 years ago
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆65Updated 2 months ago
- 🧬 Fusion of protein sequence and structural information, using denoising pre-training network for zero-shot protein engineering (eLife 2…☆73Updated 4 months ago
- Evaluating Protein Binding Interfaces with Transformer Networks☆47Updated last year
- Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity☆48Updated 2 months ago
- Fitness landscapes for antibodies☆84Updated 2 weeks ago
- S-PLM: Structure-aware Protein Language Model via Contrastive Learning between Sequence and Structure☆68Updated 2 months ago
- Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning☆65Updated last month
- Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.☆60Updated last year
- MaSIF-neosurf: surface-based protein design for ternary complexes.☆144Updated this week
- Code for humanization of antibody and nanobody☆52Updated 3 weeks ago
- ☆68Updated 3 years ago
- A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation☆72Updated last month
- Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling☆91Updated this week
- This is the official repository of paper - GeoAB: Towards Realistic Antibody Design and Reliable Affinity Maturation (ICML2024)☆40Updated last year
- open source code for Tencent tFold☆112Updated 6 months ago
- Antibody-Antigen Docking and Affinity Benchmark☆73Updated 4 years ago
- VenusFSFP: Few-Shot Protein Fitness Prediction☆93Updated last month
- Official repository of GENzyme☆54Updated 9 months ago
- ☆70Updated 3 weeks ago
- ☆87Updated last month
- code for IDR binding paper 2025☆51Updated 7 months ago
- AlphaBind code + model accompanying pre-print☆77Updated last month
- Official Implementation of IgGM☆82Updated 3 weeks ago
- ☆61Updated last year
- Sidechain conditioning and modeling for full-atom protein sequence design☆117Updated 2 months ago