Pretrainable geometric graph neural network for antibody affinity maturation
☆72Mar 18, 2025Updated last year
Alternatives and similar repositories for GearBind
Users that are interested in GearBind are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- DeepSP is an antibody-specific surrogate CNN model that can generate 30 spatial properties of an antibody solely based on their sequences…☆19Feb 23, 2026Updated last month
- Improved antibody structure-based design using inverse folding☆157Dec 9, 2025Updated 4 months ago
- open source repository☆147Nov 30, 2023Updated 2 years ago
- Baseline model for PPB-Affinity benchmark data☆37May 21, 2025Updated 10 months ago
- AlphaBind code + model accompanying pre-print☆91Jul 24, 2025Updated 8 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆45Apr 1, 2025Updated last year
- ✌🏻 Antigen-Specific Antibody Design and Optimization with Diffusion-Based Generative Models for Protein Structures (NeurIPS 2022)☆357Jun 29, 2023Updated 2 years ago
- ☆124Jul 12, 2024Updated last year
- The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…☆92Jun 11, 2025Updated 9 months ago
- Physical energy function for protein sequence design☆38May 6, 2023Updated 2 years ago
- A conditionally adapted protein language model for the generation of enzymes☆23Nov 26, 2024Updated last year
- ☆48Jan 10, 2025Updated last year
- The MULTICOM4 protein structure prediction system developed by the Bioinformatics and Machine Learning Lab at the University of Missouri …☆17Nov 27, 2025Updated 4 months ago
- Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.☆99Jul 29, 2024Updated last year
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Code for humanization of antibody and nanobody☆78Aug 28, 2025Updated 7 months ago
- ☆22Apr 10, 2025Updated 11 months ago
- Official Implementation of IgGM☆184Nov 30, 2025Updated 4 months ago
- Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity☆57Jul 9, 2025Updated 9 months ago
- ☆92Sep 7, 2022Updated 3 years ago
- This is the official repository of paper - GeoAB: Towards Realistic Antibody Design and Reliable Affinity Maturation (ICML2024)☆43Jun 17, 2024Updated last year
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆48Nov 4, 2025Updated 5 months ago
- Learning the language of protein-protein interactions☆140Jan 12, 2026Updated 2 months ago
- ☆23May 14, 2019Updated 6 years ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- Official repository for DiffPepBuilder and DiffPepDock tools☆124Oct 24, 2025Updated 5 months ago
- ☆24May 19, 2025Updated 10 months ago
- Prediction of protein melting temperatures directly from sequences☆12Apr 16, 2024Updated last year
- Polyreactivity Website☆21Jun 26, 2023Updated 2 years ago
- workflow used to prepare PPB-Affinity database☆28Aug 22, 2024Updated last year
- Computationally Restoring the Potency of a Clinical Antibody☆19Mar 1, 2024Updated 2 years ago
- Frankies Scalable, AI-Based Antibody Design Pipeline☆18Feb 20, 2026Updated last month
- Code for Pre-training Protein Encoder via Siamese Sequence-Structure Diffusion Trajectory Prediction (https://arxiv.org/abs/2301.12068)☆42Jul 9, 2023Updated 2 years ago
- Official repo for paper "AlphaFold-Multimer accurately captures interactions and dynamics of intrinsically disordered protein regions"☆17Dec 8, 2024Updated last year
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- p-IgGen: A Generative Paired Antibody Language Model☆13May 6, 2025Updated 11 months ago
- ☆117Jan 3, 2026Updated 3 months ago
- AlphaFold-initiated replica exchange protein docking☆91Jun 5, 2025Updated 10 months ago
- Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies☆410Sep 3, 2023Updated 2 years ago
- Antibody-specific masked language model☆72Mar 5, 2026Updated last month
- ☆13May 19, 2024Updated last year
- Source code for the reproduction of RibbonFold paper.☆11May 10, 2025Updated 10 months ago