S-PLM: Structure-aware Protein Language Model via Contrastive Learning between Sequence and Structure
☆75Mar 26, 2026Updated last month
Alternatives and similar repositories for S-PLM
Users that are interested in S-PLM are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆21Sep 2, 2025Updated 8 months ago
- scBSP is a specialized package designed for processing biological data, specifically in the analysis of gene expression and cell coordina…☆22Mar 22, 2026Updated last month
- official repo for scPEFT☆52Jan 14, 2026Updated 3 months ago
- This is the official repository of Prot2Token paper.☆38Jun 6, 2025Updated 10 months ago
- The first multimodal QA dataset specifically designed for evaluating large TCM language models.☆21Oct 24, 2025Updated 6 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- This is an official implementation for "MMSite: A Multi-modal Framework for the Identification of Active Sites in Proteins".☆18Jan 4, 2025Updated last year
- This is the official repository of GCP-VQVAE: A Geometry-Complete Language for Protein 3D Structure☆41Feb 13, 2026Updated 2 months ago
- Domain-PFP is a self-supervised method to predict protein functions from the domains☆12Nov 1, 2023Updated 2 years ago
- Code and Data for the paper: Multi-level Protein Structure Pre-training with Prompt Learning [ICLR 2023]☆33Aug 5, 2023Updated 2 years ago
- ☆12Nov 26, 2023Updated 2 years ago
- Reaction-Conditioned Virtual Screening of Enzymes☆42Jun 11, 2025Updated 10 months ago
- ☆32Dec 11, 2025Updated 4 months ago
- This study explored prompt-based learning to adapt the state-of-the-art image segmentation foundation model SAM for cryo-EM. Through tria…☆12Apr 27, 2025Updated last year
- This repository contains the stand-alone tool for MusiteDeep server☆36Dec 5, 2020Updated 5 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆42Mar 26, 2025Updated last year
- ☆21Oct 22, 2024Updated last year
- This is the official repository of paper - GeoAB: Towards Realistic Antibody Design and Reliable Affinity Maturation (ICML2024)☆43Jun 17, 2024Updated last year
- ☆67Mar 18, 2026Updated last month
- ☆40Sep 17, 2024Updated last year
- scGNN (single cell graph neural networks) for single cell clustering and imputation using graph neural networks☆10Aug 4, 2020Updated 5 years ago
- ☆18Jun 14, 2025Updated 10 months ago
- ☆17May 15, 2025Updated 11 months ago
- ☆33Aug 12, 2024Updated last year
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- DeepDom is an ab-initio method for protein domain boundary prediction☆16Sep 5, 2022Updated 3 years ago
- TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.☆79Apr 9, 2024Updated 2 years ago
- Comprehensive Benchmark for Protein-Peptide Complex Structure Prediction with AlphaFold3☆20Sep 4, 2025Updated 7 months ago
- Protein language model trained on coding DNA☆54Oct 20, 2024Updated last year
- ☆118Jan 3, 2026Updated 3 months ago
- A simplified drug discovery pipeline -- generating SMILE molecular with AlphaSMILES, predicting protein structure with AlphaFold, and che…☆18Aug 13, 2021Updated 4 years ago
- [ICML-23 ORAL] ProtST: Multi-Modality Learning of Protein Sequences and Biomedical Texts☆104Oct 16, 2023Updated 2 years ago
- Code for AAAI 2024 paper "PSC-CPI: Multi-Scale Protein Sequence-Structure Contrasting for Efficient and Generalizable Compound-Protein In…☆28Feb 8, 2025Updated last year
- Struct2GO:protein function prediction based on Graph pooling algorithm and AlphaFold2 structure information☆29Feb 26, 2024Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- SableBind is an open-source framework dedicated to predicting protein-ligand binding affinity☆13Feb 6, 2025Updated last year
- ☆15May 29, 2024Updated last year
- ☆10Jul 30, 2024Updated last year
- ☆12Jul 5, 2024Updated last year
- ☆14Feb 19, 2024Updated 2 years ago
- ☆15Jun 3, 2025Updated 10 months ago
- Official repository of "Multi-level Interaction Modeling for Protein Mutational Effect Prediction"☆11Jun 30, 2024Updated last year