S-PLM: Structure-aware Protein Language Model via Contrastive Learning between Sequence and Structure
☆77Aug 27, 2026Updated 3 weeks ago
Alternatives and similar repositories for S-PLM
Users that are interested in S-PLM are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆22Sep 2, 2025Updated last year
- scBSP is a specialized package designed for processing biological data, specifically in the analysis of gene expression and cell coordina…☆22Jul 23, 2026Updated last month
- This is the official repository of Prot2Token paper.☆39Jun 6, 2025Updated last year
- The first multimodal QA dataset specifically designed for evaluating large TCM language models.☆25Oct 24, 2025Updated 10 months ago
- official repo for scPEFT☆53Jan 14, 2026Updated 8 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- This is an official implementation for "MMSite: A Multi-modal Framework for the Identification of Active Sites in Proteins".☆19Jan 4, 2025Updated last year
- This is the official repository of GCP-VQVAE: A Geometry-Complete Language for Protein 3D Structure☆44May 9, 2026Updated 4 months ago
- Domain-PFP is a self-supervised method to predict protein functions from the domains☆13Nov 1, 2023Updated 2 years ago
- Code and Data for the paper: Multi-level Protein Structure Pre-training with Prompt Learning [ICLR 2023]☆33Aug 5, 2023Updated 3 years ago
- This repository contains the stand-alone tool for MusiteDeep server☆36Dec 5, 2020Updated 5 years ago
- Reaction-Conditioned Virtual Screening of Enzymes☆49Jun 13, 2026Updated 3 months ago
- ☆42Mar 26, 2025Updated last year
- Codebase for Paper: Benchmarking Real-World Applicability of Molecular Generative Models from De novo Design to Lead Optimization with Mo…☆34Aug 2, 2026Updated last month
- ☆12Nov 26, 2023Updated 2 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- This is the official repository of paper - GeoAB: Towards Realistic Antibody Design and Reliable Affinity Maturation (ICML2024)☆46Jun 17, 2024Updated 2 years ago
- ☆21Oct 22, 2024Updated last year
- Official PyTorch implementation of "ProteinMAE: Masked Autoencoder for Protein Surface Self-supervised Learning".☆19May 7, 2024Updated 2 years ago
- A benchmark for comprehensive evaluation on protein structure tokenization methods☆56Aug 2, 2025Updated last year
- scGNN (single cell graph neural networks) for single cell clustering and imputation using graph neural networks☆10Aug 4, 2020Updated 6 years ago
- ☆40Sep 17, 2024Updated 2 years ago
- DeepDom is an ab-initio method for protein domain boundary prediction☆16Sep 5, 2022Updated 4 years ago
- ☆38Updated this week
- ☆19Jun 14, 2025Updated last year
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- ☆63Sep 11, 2024Updated 2 years ago
- A simplified drug discovery pipeline -- generating SMILE molecular with AlphaSMILES, predicting protein structure with AlphaFold, and che…☆18Aug 13, 2021Updated 5 years ago
- Codebase of paper "Structure Language Models for Protein Conformation Generation" (ICLR'25)☆84May 27, 2026Updated 3 months ago
- ☆33Aug 12, 2024Updated 2 years ago
- Comprehensive Benchmark for Protein-Peptide Complex Structure Prediction with AlphaFold3☆19Sep 4, 2025Updated last year
- ☆13May 18, 2025Updated last year
- 📈 Fusion of sequence, structure and feature information to improve protein solubility prediction (IEEE BIBM 2024).☆36May 16, 2025Updated last year
- ☆14Feb 19, 2024Updated 2 years ago
- ☆27May 16, 2026Updated 4 months ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- ☆118Jan 3, 2026Updated 8 months ago
- Code for AAAI 2024 paper "PSC-CPI: Multi-Scale Protein Sequence-Structure Contrasting for Efficient and Generalizable Compound-Protein In…☆28Feb 8, 2025Updated last year
- [ICML-23 ORAL] ProtST: Multi-Modality Learning of Protein Sequences and Biomedical Texts☆107Oct 16, 2023Updated 2 years ago
- SableBind is an open-source framework dedicated to predicting protein-ligand binding affinity☆13Feb 6, 2025Updated last year
- Protein language model trained on coding DNA☆56Oct 20, 2024Updated last year
- Struct2GO:protein function prediction based on Graph pooling algorithm and AlphaFold2 structure information☆29Feb 26, 2024Updated 2 years ago
- ☆10Jul 30, 2024Updated 2 years ago