EDAPINENUT / GeoABLinks
This is the official repository of paper - GeoAB: Towards Realistic Antibody Design and Reliable Affinity Maturation (ICML2024)
☆39Updated 11 months ago
Alternatives and similar repositories for GeoAB
Users that are interested in GeoAB are comparing it to the libraries listed below
Sorting:
- Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.☆59Updated last year
- The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…☆71Updated this week
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆43Updated 6 months ago
- ☆94Updated this week
- Evaluating Protein Binding Interfaces with Transformer Networks☆45Updated last year
- Official repository of EnzymeFlow☆92Updated 5 months ago
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆109Updated 3 months ago
- Code for humanization of antibody and nanobody☆42Updated 6 months ago
- ☆65Updated 3 months ago
- [ICLR2025] Official Implementation of IgGM: A Generative Model for Functional Antibody and Nanobody Design☆74Updated 3 weeks ago
- ☆112Updated this week
- Code of “Multi-Modal Deep Learning Enables Ultrafast and Accurate Annotation of Enzymatic Active Sites”☆36Updated 3 months ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆48Updated 2 weeks ago
- Antibody-specific masked language model☆55Updated last year
- Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.☆94Updated 10 months ago
- ☆81Updated 2 months ago
- Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity☆31Updated last month
- Official repository of GENzyme☆51Updated 6 months ago
- A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation☆48Updated 2 weeks ago
- ☆40Updated 4 months ago
- Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.☆75Updated 11 months ago
- ☆89Updated 7 months ago
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆59Updated 3 months ago
- Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling☆55Updated 10 months ago
- Sidechain conditioning and modeling for full-atom protein sequence design☆106Updated 3 months ago
- Antibody paratope prediction using Graph Neural Networks with minimal feature vectors☆37Updated 2 years ago
- Structure-conditioned masked language modeling for protein sequence design☆62Updated last year
- Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)☆36Updated 6 months ago
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆55Updated 2 weeks ago
- Predicting mutational effects on protein-protein binding via a side-chain diffusion probabilistic model (NeurIPS 2023 Poster)☆35Updated last year