moritzgls / ESM-EffectLinks
☆15Updated 9 months ago
Alternatives and similar repositories for ESM-Effect
Users that are interested in ESM-Effect are comparing it to the libraries listed below
Sorting:
- ☆39Updated last year
- ☆33Updated last year
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆71Updated 5 months ago
- ☆62Updated last year
- Active Learning-Assisted Directed Evolution for Protein Engineering☆70Updated 3 weeks ago
- Predicts the solubility and usability for purification of proteins expressed in E. coli using protein language models☆40Updated 11 months ago
- ☆71Updated 8 months ago
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆46Updated 2 weeks ago
- Efficient implementatin of ESM family.☆76Updated 2 months ago
- 🧬 Fusion of protein sequence and structural information, using denoising pre-training network for zero-shot protein engineering (eLife 2…☆78Updated 6 months ago
- ☆47Updated 10 months ago
- Fast deep learning methods for large-scale protein-protein interaction screening☆99Updated 3 months ago
- ☆71Updated last year
- ☆29Updated 3 weeks ago
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆32Updated last year
- ProteusAI is a library for the machine learning driven engineering of proteins. The library enables workflows from protein structure pred…☆66Updated 2 months ago
- Deep Learning Library and Benchmark for Protein Sequence Learning (Bioinformatics 2025)☆35Updated 4 months ago
- Structure-conditioned masked language modeling for protein sequence design☆69Updated last year
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆57Updated 5 months ago
- ☆21Updated last year
- PLM based active learning model for protein engineering☆84Updated last year
- ISMB-24/Bioinformatics: Tertiary Structure-based RNA Inverse Folding with Generative Diffusion Models☆51Updated last year
- ☆81Updated 5 months ago
- Learning the language of protein-protein interactions☆103Updated last month
- ☆91Updated last month
- Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.☆60Updated 2 years ago
- ☆22Updated 11 months ago
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆119Updated 8 months ago
- GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures☆61Updated last year
- RAG-ESM is a retrieval-augmented framework that allows to condition pretrained ESM2 protein language models on homologous sequences☆25Updated 3 months ago