Easily submitting multiple PBS jobs or running local jobs in parallel. Multiple input files supported.
☆29May 24, 2023Updated 2 years ago
Alternatives and similar repositories for easy_qsub
Users that are interested in easy_qsub are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A unified array job submitter for LSF, SGE/UGE and Slurm☆32Oct 15, 2024Updated last year
- NOTE: This package has been renamed to sparrow and will be submitted to Bioconductor 3.14. Please use that package instead. This is kept …☆22Nov 16, 2020Updated 5 years ago
- Robust individual and aggregate checksums for nucleotide sequences☆17Mar 3, 2026Updated 3 weeks ago
- Shared k-mer content between two genomes☆19Jun 21, 2023Updated 2 years ago
- Microbiome profiling☆15Nov 20, 2025Updated 4 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Interactive Differential Expression Analyzer☆37Sep 7, 2020Updated 5 years ago
- re-assembly and analysis of the Marine Microbial Eukaryotic Transcriptome Sequencing Project☆14Sep 18, 2018Updated 7 years ago
- a pileup library that embraces the huge☆43Oct 2, 2020Updated 5 years ago
- ParaFly - parallel cmd processing utility☆15Aug 10, 2021Updated 4 years ago
- easy_sbatch - Batch submitting Slurm jobs with script templates☆16Dec 28, 2021Updated 4 years ago
- A filter algorithm with program to filter an alignment or mapping file☆12May 15, 2025Updated 10 months ago
- Openbiox 翻译小组发起并维护的优秀 Workflow 翻译项目☆27Mar 7, 2020Updated 6 years ago
- This repo is archived, the these workflows are still available in the GATK repository under the scripts directory. The workflows are also…☆11Mar 9, 2020Updated 6 years ago
- Iterative Gene clUster Analysis, a high-throughput method for gene cluster family identification.☆17Feb 26, 2026Updated last month
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- JEME method for predicting enhancer targets☆11Jul 15, 2017Updated 8 years ago
- 采用开源论坛系统Flarum建设GATK中文社区，该论坛所有帖子将以markdown代码形式发帖，所有的markdown源代码都会同步存放在此github的organization的这个project下面。GATK中文社区地址是：https://www.gatk.com.…☆17Oct 21, 2017Updated 8 years ago
- Genome assembly soft-masking using Red (REpeat Detector)☆18Dec 7, 2018Updated 7 years ago
- Interactive table from gemini output☆10Mar 5, 2019Updated 7 years ago
- R/Package Version Check☆22Oct 22, 2021Updated 4 years ago
- Metagenomics-focused BAM file manipulation☆15Jul 8, 2019Updated 6 years ago
- Prostate Cancer Alteration Signature Analysis https://xsliulab.github.io/PC_CNA_signature/☆13May 17, 2021Updated 4 years ago
- Genome free discovery and classification of miRNAs from small RNA-Seq with random forests☆11Jun 12, 2018Updated 7 years ago
- De novo chromosome-level scaffolding and phasing tool using Hi-C☆30Nov 23, 2025Updated 4 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Catalogue of pairwise alignment algorithms and benchmarks☆25Jan 6, 2026Updated 2 months ago
- Easier download/extract of FASTA/Q read data and metadata from the ENA, NCBI, AWS or GCP.☆300Aug 18, 2025Updated 7 months ago
- Intro how to install and use SGE(Sun Grid Engine) on ConteOS 7☆19Nov 12, 2018Updated 7 years ago
- Viral Identification and Discovery - A viral characterization pipeline built in Nextflow.☆11May 19, 2020Updated 5 years ago
- simple bioinformatics command-line (t)ools (i) (w)ished (i) (h)ad.☆44Mar 29, 2023Updated 2 years ago
- Iterate k-min-mers from a DNA sequence in Rust☆13Apr 8, 2024Updated last year
- an interactive visualization and interpretation framework of reference-projected pangenome graphs☆38Feb 15, 2025Updated last year
- ☆16Jun 18, 2020Updated 5 years ago
- We present a customizable computational tool, PathSeq2.0, to enable the discovery and identification of microbial sequences in metagenomi…☆12Jan 20, 2018Updated 8 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Multi-sample cancer phylogeny reconstruction☆36Oct 19, 2017Updated 8 years ago
- Filter of Pairwise Alignement☆44Jan 31, 2022Updated 4 years ago
- Integrated platform for unifying scientific workflow management and graph databases for transcriptome data analysis.☆10Oct 19, 2018Updated 7 years ago
- Practical, reusable scripts for bioinformatics☆102Feb 12, 2019Updated 7 years ago
- ☆10Jun 21, 2015Updated 10 years ago
- ☆35Nov 8, 2023Updated 2 years ago
- ☆15Jan 18, 2023Updated 3 years ago