shenwei356 / easy_qsub
Easily submitting multiple PBS jobs or running local jobs in parallel. Multiple input files supported.
☆28Updated last year
Alternatives and similar repositories for easy_qsub:
Users that are interested in easy_qsub are comparing it to the libraries listed below
- Symmetric DUST for finding low-complexity regions in DNA sequences☆41Updated last year
- A sparse k-mer graph based, memory-efficient genome assembler.☆9Updated 6 years ago
- Please switch to https://github.com/OpenGene/defastq☆29Updated 6 years ago
- This repository has been archived, currently maintained version is at https://github.com/iii-companion/companion☆21Updated 4 years ago
- ☆28Updated last month
- small RNA analysis from NGS data☆37Updated 8 months ago
- Lightweight single-html-file-based Genome Segments playground for Visualize genome features cluster(gene arrow map or other features), ad…☆32Updated 4 years ago
- RetroSeq is a bioinformatics tool that searches for mobile element insertions from aligned reads in a BAM file and a library of reference…☆66Updated 2 years ago
- SAMStat displays various properties of next-generation sequencing reads stored in SAM/BAM format.☆24Updated last year
- A set of workflows written in Nextflow for Genome Annotation.☆45Updated 10 months ago
- MIRA sequence assembler☆29Updated 4 months ago
- PhyloCSF++ computes PhyloCSF tracks for whole-genome multiple sequence alignments, scores single MSA, annotates CDS features in GFF/GTF f…☆31Updated 3 years ago
- TreeBeST: Tree Building guided by Species Tree☆14Updated 14 years ago
- Specifications for PacBio® native file formats☆30Updated 5 months ago
- Pauvre: QC and genome browser plotting Oxford Nanopore and PacBio long reads.☆54Updated 6 months ago
- Adapter trimming and virtual library creation for Illumina Nextera Mate Pair libraries.☆54Updated 6 years ago
- Automated next generation DNA sequencing analysis pipeline suited for clinical tests, with >99.9% sensitivity to Sanger sequencing at rea…☆26Updated 5 years ago
- Whole genome core alignments from multiple draft genomes☆13Updated 8 years ago
- Histosketching Using Little Kmers☆56Updated last year
- Code for the paper "BIOLITMAP: a web-based geolocated and temporal visualization of the evolution of bioinformatics publications" in Oxfo…☆20Updated 6 years ago
- showTree can visualize the phylogeny, protein sequences and protein domains of a gene family in one figure.☆30Updated 6 years ago
- Miscellaneous Bioinformatics scripts etc mostly in Python☆45Updated this week
- ☆51Updated 5 years ago
- HomBlocks: A multiple-alignment construction pipeline for organelle phylogenomics based on locally collinear block searching☆34Updated 7 years ago
- MapCaller – An efficient and versatile approach for short-read alignment and variant detection in high-throughput sequenced genomes☆30Updated 4 years ago
- Find Unique genomic Regions☆29Updated last month
- Trimming tool for Oxford Nanopore sequence data☆21Updated 3 years ago
- Converting and demultiplexing of PacBio BAM files into gzipped fasta and fastq files.☆37Updated 2 years ago
- Minimizer-based assembly scaffolding and mapping using long reads☆39Updated 7 months ago
- Pipeline for de novo clustering of long transcriptomic reads☆26Updated 3 years ago