fastq quality assessment and filtering tool
☆18Dec 10, 2022Updated 3 years ago
Alternatives and similar repositories for FastqPuri
Users that are interested in FastqPuri are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- TreeGrafter is a new software tool for annotating uncharacterized protein sequences, using annotated phylogenetic trees.☆13Mar 18, 2026Updated 3 weeks ago
- MIRROR OF: The European Molecular Biology Open Software Suite (from git://anonscm.debian.org/debian-med/emboss.git)☆32Feb 18, 2022Updated 4 years ago
- De novo transcriptome assembler for short reads☆64Mar 12, 2018Updated 8 years ago
- A nextflow pipeline for polishing CLR assemblies☆18Feb 3, 2023Updated 3 years ago
- Differential expression and allelic analysis, nonparametric statistics☆31Jan 3, 2025Updated last year
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Ktrim: an extra-fast and accurate adapter- and quality-trimmer for sequencing data☆31Feb 7, 2026Updated 2 months ago
- Annocript is a pipeline for the annotation of de-novo generated transcriptomes. It executes BLAST analysis with UniProt, NCBI Conserved …☆56May 11, 2020Updated 5 years ago
- use paired-end transcriptome reads to scaffold genomes☆11May 30, 2019Updated 6 years ago
- ☆36Apr 17, 2025Updated 11 months ago
- Fast, sensitive and accurate protein remote homology search on GPUs☆16May 6, 2024Updated last year
- A high performance tool to identify orthologs and paralogs across genomes.☆27Mar 8, 2023Updated 3 years ago
- De novo genome assembler.☆11Jul 30, 2018Updated 7 years ago
- Scaffolding with RNA-seq read alignment☆21Jul 10, 2018Updated 7 years ago
- The new version is available at https://github.com/RabbitBio/RabbitQCPlus☆26Jun 20, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- Program to run the SOWH test (likelihood-based test used to compare tree topologies which are not specified a priori)☆11May 3, 2024Updated last year
- Metagenomic binning using low-density hashing a support vector machine☆20Oct 2, 2020Updated 5 years ago
- Annotated Genome Optimization Using Transcriptome Information☆20May 31, 2020Updated 5 years ago
- Annotate DNA sequences for Gene Ontology terms☆41Sep 11, 2025Updated 6 months ago
- Merge transcriptome assemblies☆31Oct 6, 2016Updated 9 years ago
- Prepare Sailfish and Salmon output for downstream analysis☆42Jun 6, 2019Updated 6 years ago
- Seamless Integration of BLAST Sequence Searches in R☆30Sep 10, 2023Updated 2 years ago
- A high throughput sequence read toolset using a streaming approach facilitated by Linux pipes☆51Mar 25, 2026Updated 2 weeks ago
- The original version of MGA has been archived - please see https://github.com/crukci-bioinformatics/mga2 instead.☆25Apr 15, 2021Updated 4 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Visualization and management of denovo transcriptomes☆10Feb 26, 2021Updated 5 years ago
- Keep Me Around: Intron Retention Detection☆31Jan 30, 2019Updated 7 years ago
- ☆11Mar 5, 2025Updated last year
- The shiny app that accompanies the ngsReports R package☆13Jun 10, 2021Updated 4 years ago
- ☆18Jan 14, 2026Updated 2 months ago
- A software-suite to perform multiple protein structure alignment and structure feature extraction.☆31Aug 9, 2023Updated 2 years ago
- Hybrid error correction approach for long reads using overlap graph☆11Sep 26, 2023Updated 2 years ago
- ☆16Jul 16, 2016Updated 9 years ago
- Robust and Efficient Lossless Compression of Quality Scores in FASTQ Files with Random Access Decompression Functionality☆15Jun 3, 2020Updated 5 years ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Human pan-genome analysis pipeline☆31Apr 30, 2020Updated 5 years ago
- Helper script for bioconductor/bioconductor_docker☆13Mar 13, 2026Updated 3 weeks ago
- ☆11Sep 16, 2021Updated 4 years ago
- ☆28Mar 30, 2026Updated last week
- Tools to annotate genomes using long read transcriptomics data☆45Dec 8, 2020Updated 5 years ago
- Scripts to estimate genome size and coverage from kmer distribution generated by jellyfish☆57Jan 26, 2023Updated 3 years ago
- An Fast variant calling tool to detection germline and somatic variants☆12Feb 21, 2026Updated last month