ay-lab / fithicLinks
Fit-Hi-C is a tool for assigning statistical confidence estimates to chromosomal contact maps produced by genome-wide genome architecture assays such as Hi-C.
☆91Updated 3 years ago
Alternatives and similar repositories for fithic
Users that are interested in fithic are comparing it to the libraries listed below
Sorting:
- TAD calling, phase imputation, 3D modeling and more for diploid single-cell Hi-C (Dip-C) and general Hi-C☆113Updated 4 years ago
- Extract 3D contacts (.pairs) from sequencing alignments☆119Updated last month
- perl cworld module and collection of utility/analysis scripts for C data (3C, 4C, 5C, Hi-C)☆67Updated 6 years ago
- HiC uniform processing pipeline☆61Updated 2 years ago
- Allele-specific alignment sorting☆61Updated 2 years ago
- dcHiC: Differential compartment analysis for Hi-C datasets☆73Updated last year
- A fast and efficient tool for converting chromatin interaction data between genome assemblies☆75Updated 4 months ago
- FAN-C: Framework for the ANalysis of C-like data☆120Updated last year
- A versatile tool to perform pile-up analysis on Hi-C data in .cool format.☆80Updated last year
- Publication quality NGS track plotting