sellerslab / geminiLinks
GEMINI: A variational Bayesian approach to identify genetic interactions from combinatorial CRISPR screens
☆16Updated 3 years ago
Alternatives and similar repositories for gemini
Users that are interested in gemini are comparing it to the libraries listed below
Sorting:
- Code to run OncoSig Analyses☆18Updated 5 years ago
- Tools for assessing clustering robustness☆31Updated last week
- 🧭 Navigate single-cell RNA-seq datasets in your web browser.☆29Updated 2 years ago
- Code associated with MIX-seq manuscript☆15Updated 5 years ago
- Explore the cancer relevance of your gene list☆52Updated last month
- Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.☆29Updated 4 years ago
- Summary statistics for repertoires☆17Updated 2 years ago
- Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles☆30Updated 5 years ago
- Adaptive Daisy Model to discriminate core-fitness/context-specific essential genes in large scale CRISPR-Cas9 screens☆24Updated 6 years ago
- epigenome analysis to rank transcription factors☆15Updated 6 years ago
- ImReP is a computational method for rapid and accurate profiling of the adaptive immune repertoire from regular RNA-Seq data.☆29Updated 6 years ago
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆30Updated 5 years ago
- Code to calculate the Splicing Z Score (SpliZ) for single cell RNA-seq splicing analysis☆35Updated 4 years ago
- Single cell interactive plotting tools☆24Updated 5 years ago
- An R package to implement Differential Gene Set Enrichment Analysis (DGSEA): A statistical approach to quantify the relative enrichment o…☆14Updated 2 years ago
- Perturb-seq analysis package☆16Updated last year
- SCASA: Single cell transcript quantification tool☆22Updated 2 years ago
- ☆20Updated 8 years ago
- CircRNA testing and ploting R package☆10Updated 5 years ago
- Vaeda method for computational doublet annotation☆18Updated last year
- RNA velocity validation☆22Updated 3 years ago
- scRNAseq integration with triplet neural networks☆41Updated last week
- Gene Expression Decomposition and Integration☆19Updated 11 months ago
- Inferring gene co-expression networks from single cell gene expression data☆28Updated 3 years ago
- Genomic trajectories (pseudotimes) in the presence of heterogenous environmental and genetic backgrounds☆11Updated 6 years ago
- Multi-study integration of cellular trajectories☆19Updated 5 years ago
- Mean Alterations Using Discrete Expression☆14Updated last year
- ☆25Updated 3 years ago
- scover☆24Updated 2 years ago
- ☆44Updated last year