priyanka8993 / EMT_score_calculationLinks
☆20Updated 4 years ago
Alternatives and similar repositories for EMT_score_calculation
Users that are interested in EMT_score_calculation are comparing it to the libraries listed below
Sorting:
- ☆63Updated 4 years ago
- Bostongene cell deconvolution algorithm from RNAseq☆55Updated last year
- Pipeline for characterizing metebolic heterogeneity from single-cell RNA-seq data☆22Updated 3 years ago
- ☆29Updated 7 years ago
- A novel unsupervised batch removal framework, called iMAP, based on neural networks.☆35Updated 3 years ago
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆46Updated last year
- Calculating Tumor microenvironment score☆29Updated 2 years ago
- R package (compatible with SCope) to create generic .loom files and extend them with other data e.g.: SCENIC regulons, Seurat clusters an…☆42Updated 3 years ago
- Enrichment Networks for Pathway Enrichment Analysis☆55Updated 2 years ago
- This repo contains the code necessary to reproduce the clusters found in "The Immune Landscape of Cancer".☆18Updated 5 years ago
- 🐯 tigeR: Tumor Immunotherapy Gene Expression Data Analysis R package☆33Updated last month
- Code to reproduce TNBC analysis and figures☆24Updated 3 years ago
- Dichotomous of innate immune landscape☆17Updated 5 years ago
- Reproducibility repository accompanying Wilk, Rustagi, Zhao, et al. "A single-cell atlas of the peripheral immune response to severe COVI…☆49Updated 3 years ago
- ☆56Updated last year
- Cluster single cells and analyze cell clade relationships with colorful visualizations.☆45Updated 3 years ago
- The source code of web server TIP, including example data.☆19Updated 6 years ago
- ☆47Updated last year
- Immune evasion before tumor invasion in early squamous lung cell carcinogenesis☆16Updated 4 years ago
- ☆21Updated 3 years ago
- ☆62Updated 5 years ago
- R package for Bioconductor submission☆35Updated 2 years ago
- All software used for “Decoding human fetal liver haematopoiesis” (Popescu, Botting, Stephenson et al., 2019).☆39Updated 5 years ago
- ☆47Updated 5 years ago
- Pseudotime Analysis for Bulk Data☆15Updated 11 months ago
- Repository containing all code for secondary analysis in the manuscript "On the design of CRISPR-based single cell molecular screens", Hi…☆26Updated 3 years ago
- ☆15Updated 3 years ago
- TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020☆32Updated 3 years ago
- ☆56Updated last year
- Immunology-related bioinformatics data and tools☆74Updated last year