Alternatives and similar repositories for SimilarityRegression

Users that are interested in SimilarityRegression are comparing it to the libraries listed below

• zhongw2 / GeneTEFlow
  ☆23Updated 4 years ago
• flemingtonlab / SpliceTools
  ☆17Updated last year
• a-velt / Mfuzz_RNAseq
  A R script to perform clustering of gene expression time-series RNA-seq data with Mfuzz.
  ☆23Updated 6 years ago
• HenrikBengtsson / TopDom
  R package: TopDom - An efficient and Deterministic Method for identifying Topological Domains in Genomes
  ☆21Updated 2 years ago
• battle-lab / twn_tsn
  Transcriptome-wide network
  ☆16Updated 6 years ago
• homeveg / nuctools
  software for analysis of chromatin feature occupancy profiles from high-throughput sequencing data
  ☆17Updated 6 years ago
• comprna / ORQAS
  ORF Quantification pipeline for Alternative Splicing
  ☆16Updated 4 years ago
• ConesaLab / acorde
  Isoform co-usage networks from single-cell RNA-seq data
  ☆16Updated last year
• Xinglab / isoCirc
  isoCirc
  ☆10Updated 2 years ago
• YeoLab / gscripts
  General Use Scripts and Helper functions
  ☆16Updated 7 years ago
• eudoraleer / scasa
  SCASA: Single cell transcript quantification tool
  ☆22Updated 2 years ago
• jkimlab / msPIPE
  ☆20Updated 2 years ago
• qqwang-berkeley / JUM
  A tool for annotation-free differential analysis of tissue-specific pre-mRNA alternative splicing patterns
  ☆30Updated 2 years ago
• XiaoTaoWang / StripeCaller
  A toolkit for analyzing architectural stripes
  ☆20Updated last year
• JSB-UCLA / Clipper
  A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions
  ☆41Updated 3 years ago
• a2iEditing / deNovo-Detect
  ☆13Updated 3 years ago
• AdelmanLab / NIH_scripts
  A collection of perl scripts for NGS analysis
  ☆17Updated last year
• icbi-lab / NeoFuse
  NeoFuse is a user-friendly pipeline for the prediction of fusion neoantigens from tumor RNA-seq data.
  ☆20Updated 3 years ago
• djhn75 / RNAEditor
  ☆15Updated 3 years ago
• mdozmorov / RNA-seq
  RNA-seq analysis scripts
  ☆16Updated 3 weeks ago
• hemberg-lab / MicroExonator
  Snakemake pipeline for microexon discovery and quantification
  ☆20Updated last year
• oicr-gsi / sequenza
  Workflow for Sequenza, cellularity and ploidy
  ☆26Updated 5 months ago
• jsh58 / DMRfinder
  Identifying differentially methylated regions from MethylC-seq (bisulfite-sequencing) data
  ☆28Updated 2 years ago
• ashleymaeconard / TIMEOR
  TIMEOR: Trajectory Inference and Mechanism Exploration with Omics Data in R
  ☆17Updated 3 years ago
• juliaolivieri / SpliZ_pipeline
  Code to calculate the Splicing Z Score (SpliZ) for single cell RNA-seq splicing analysis
  ☆35Updated 4 years ago
• GeneFeng / CircSplice
  CircSplice
  ☆12Updated 6 years ago
• timplab / nanoNOMe
  nanoNOMe (Nucleosome Occupancy and Methylome nanopore sequencing) Analysis
  ☆20Updated 3 years ago
• Xinglab / lr2rmats
  Long read to rMATS
  ☆32Updated 2 years ago
• khuranalab / CompositeDriver
  Combined mutation recurrence and functional impact to identify coding and non-coding cancer drivers
  ☆15Updated 7 years ago
• deWitLab / GENOVA
  GENome Organisation Visual Analytics
  ☆15Updated 4 years ago