smlmbrt / SimilarityRegressionLinks
Predicting TF sequence-specificity similarity with weighted alignments
☆13Updated 5 years ago
Alternatives and similar repositories for SimilarityRegression
Users that are interested in SimilarityRegression are comparing it to the libraries listed below
Sorting:
- ☆23Updated 4 years ago
- ORF Quantification pipeline for Alternative Splicing☆16Updated 4 years ago
- HOT regions paper☆11Updated 5 years ago
- Pipelines for NGS data preprocessing by the Bock lab and friends☆21Updated 2 years ago
- ☆15Updated 2 years ago
- A R script to perform clustering of gene expression time-series RNA-seq data with Mfuzz.☆19Updated 6 years ago
- scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper☆24Updated 2 years ago
- software for analysis of chromatin feature occupancy profiles from high-throughput sequencing data☆17Updated 5 years ago
- isoCirc☆10Updated last year
- TIMEOR: Trajectory Inference and Mechanism Exploration with Omics Data in R☆16Updated 3 years ago
- Identifying differentially methylated regions from MethylC-seq (bisulfite-sequencing) data☆28Updated last year
- GENome Organisation Visual Analytics☆15Updated 3 years ago
- Combined mutation recurrence and functional impact to identify coding and non-coding cancer drivers☆15Updated 6 years ago
- a set of NGS pipelines☆24Updated last week
- Analysis pipeline for our circSC manuscript☆13Updated 3 years ago
- Scripts and notebooks used in Akgol Oksuz et al. paper☆11Updated 4 years ago
- Long read to rMATS☆31Updated 2 years ago
- ☆16Updated 8 years ago
- RNA-seq analysis scripts☆15Updated last month
- An R package for Splice-aware quantification of translation using Ribo-seq data☆18Updated last year
- Reconstructs complex variation using Bionano optical mapping data and breakpoint graph data☆17Updated last year
- ☆12Updated 2 years ago
- A collection of perl scripts for NGS analysis☆16Updated 8 months ago
- ☆10Updated 3 weeks ago
- ☆17Updated 4 years ago
- Pipeline for Quality Control of Ribo-Seq data, selection of P-site offsets, and codon usage statistics.☆18Updated last year
- Isoform co-usage networks from single-cell RNA-seq data☆16Updated last year
- ☆17Updated 10 months ago
- Code and data from Koche et al. Extrachromosomal circular DNA drives oncogenic genome remodeling in neuroblastoma (2020)☆15Updated 4 years ago
- An integrated web-based resource for mapping functional networks of long or circular forms of non-coding RNAs☆10Updated 5 years ago