Molecular Epidemiology of Viruses in R
☆20Sep 24, 2015Updated 10 years ago
Alternatives and similar repositories for mevr-course-2016
Users that are interested in mevr-course-2016 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- R Package - Dynamical Systems Approach to Infectious Disease Epidemiology☆26Jan 22, 2024Updated 2 years ago
- ☆12May 12, 2019Updated 6 years ago
- R package to generate the same BEAST2 XML parameter files as generated by BEAUti 2☆13Dec 8, 2025Updated 4 months ago
- Cluster Investigation & Virus Epidemiology Tool☆50Jun 17, 2025Updated 10 months ago
- An R package for the analysis of infectious disease transmission data☆10Nov 8, 2021Updated 4 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- CRAN Task View: Epidemiology☆23Mar 17, 2026Updated last month
- An R package to accompany the Epidemiology R Handbook, a free open-access R reference manual for applied epidemiologists and public healt…☆53May 16, 2025Updated 11 months ago
- Phylogenetic plots for R and ggplot☆27Oct 3, 2012Updated 13 years ago
- Repository for the R for Epidemiology book☆30Dec 31, 2025Updated 3 months ago
- Daily analyses of genomic SARS-CoV-2 data☆15Nov 8, 2022Updated 3 years ago
- ☆18Mar 20, 2026Updated 3 weeks ago
- R Package of methods and data for spatial epidemiology☆34Feb 22, 2023Updated 3 years ago
- ☆22Apr 10, 2026Updated last week
- Coalescent simulation and likelihood for phylodynamic inference☆14May 15, 2025Updated 11 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- An R package containing functions used in the CDC Flu Forecasting competition☆11Oct 18, 2020Updated 5 years ago
- Covid-19 epidemiology - data and analysis☆11Dec 7, 2023Updated 2 years ago
- Analysis of global migration patterns of seasonal influenza viruses☆22Jul 24, 2019Updated 6 years ago
- PhyDyn: Epidemiological modelling in BEAST☆21Dec 22, 2022Updated 3 years ago
- Time varying vector autoregressive state space modeling of community interactions in a Bayesian framework☆12Oct 4, 2021Updated 4 years ago
- Inferring spatiotemporal dynamics of the H1N1 influenza pandemic from sequence data☆33Oct 25, 2013Updated 12 years ago
- Visualization tool for genetic reassortment☆21Nov 1, 2025Updated 5 months ago
- Material for advanced epidemiology module in MPH☆13Jan 30, 2025Updated last year
- ☆14Apr 28, 2019Updated 6 years ago
- Serverless GPU API endpoints on Runpod - Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Principles & Practice of Data Visualization, CS631 Spring 2018☆39May 13, 2019Updated 6 years ago
- ☆20Nov 18, 2021Updated 4 years ago
- Repository for Host-Pathogen Phylogeny Project. Paper DOI: 10.1038/nature22975☆15May 7, 2020Updated 5 years ago
- R package for statistical inference of spatiotemporal partially observed Markov processes☆12Dec 21, 2024Updated last year
- The Zika bioinformatics pipeline☆37Mar 29, 2020Updated 6 years ago
- A collection of htmlwidgets handy for epidemiology, etc.☆13Jul 5, 2015Updated 10 years ago
- Mapping in R workshop demonstrating how to use R/ RStudio to work with spatial data for mapping and visualization.☆11Dec 2, 2021Updated 4 years ago
- Scripts for building the ARTIC lab-on-an-SSD☆11Sep 9, 2020Updated 5 years ago
- Reproducible Research in R for Ocean Biosciences: Open-science Training Seminar☆10Sep 27, 2019Updated 6 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- ☆10Jun 16, 2017Updated 8 years ago
- ☆14Dec 15, 2019Updated 6 years ago
- Posterior Analysis of Coalescent Trees☆14Aug 6, 2015Updated 10 years ago
- Inference of putative transmission phylogenetic clusters☆12Oct 13, 2020Updated 5 years ago
- R + Markdown + Jekyll + htmlwidgets☆10Mar 24, 2017Updated 9 years ago
- Epidemiological agent-based modelling packages in both python and C++. Published at: https://doi.org/10.5334/jors.449.☆20Sep 12, 2025Updated 7 months ago
- Leaping through tree space: continuous phylogenetic inference for rooted and unrooted trees☆12Sep 6, 2023Updated 2 years ago