YuLab-SMU / tidytreeLinks
A Tidy Tool for Phylogenetic Tree Data Manipulation
☆56Updated 11 months ago
Alternatives and similar repositories for tidytree
Users that are interested in tidytree are comparing it to the libraries listed below
Sorting:
- Seamless Integration of BLAST Sequence Searches in R☆31Updated last year
- A Toolbox for Manipulating Biological Sequences in R☆22Updated 2 years ago
- ☆20Updated last year
- fastqcr: Quality Control of Sequencing Data☆73Updated last year
- This repo contains the code for a shiny app that allows for visualization of subset phylogenetic trees☆15Updated 6 years ago
- Add Geom Layers On Circular Or Other Layout Tree Of “ggtree”☆94Updated 2 weeks ago
- Base Classes and Functions for Phylogenetic Tree Input and Output☆103Updated 3 months ago
- Efficient manipulation of biological strings☆65Updated 3 weeks ago
- An automated pipeline for retrieving orthologous DNA sequences from GenBank in R☆24Updated 11 months ago
- babette is an R package to work with BEAST2☆46Updated last month
- User-Friendly R Package for Supervised Machine Learning Pipelines☆58Updated 4 months ago
- Analysis of Phylogenetics and Evolution☆69Updated last month
- An Amazing Shiny App☆17Updated 3 years ago
- Meta package for processing and visualizing tree with data☆28Updated 3 years ago
- An interactive web application for demonstrating and using phyloseq.☆60Updated 5 years ago
- An R-based approach for preprocessing and aligning 16S, metagenomic, and metatranscriptomic data (PathoScope version 3.0)☆19Updated last week
- Easy to define segments in y-axis for 'ggplot2'.☆28Updated 5 years ago
- Genome Interval Arithmetic in R☆93Updated 2 weeks ago
- Analysis with Profile Hidden Markov Models☆22Updated last year
- K-mer Counting for Biological Sequence Analysis☆27Updated 6 years ago
- a take on ordination plots using ggplot2☆65Updated 11 months ago
- ☆19Updated last year
- gcplyr is an R package that facilitates wrangling and analysis of microbial growth curve data☆35Updated 4 months ago
- Htmlwidgets binding R commands to the BioCircos.js library☆39Updated 6 years ago
- Drawing 'dendrogram' using 'ggtree'☆13Updated 3 months ago
- ☆17Updated 7 years ago
- Growthcurver is an R package that fits growth curve data to a standard form of the logistic equation common in ecology and evolution whos…☆47Updated 3 years ago
- R interface to 'Gos'☆39Updated 2 years ago
- Source files for online resources of Bioinformatics of Infectious Diseases course☆22Updated 5 years ago
- flexible pipelines for scalable secretome prediction, R package☆12Updated 6 years ago