YuLab-SMU / tidytree
A Tidy Tool for Phylogenetic Tree Data Manipulation
☆55Updated 7 months ago
Alternatives and similar repositories for tidytree:
Users that are interested in tidytree are comparing it to the libraries listed below
- A Toolbox for Manipulating Biological Sequences in R☆22Updated 2 years ago
- Seamless Integration of BLAST Sequence Searches in R☆31Updated last year
- Add Geom Layers On Circular Or Other Layout Tree Of “ggtree”☆90Updated 4 months ago
- ☆19Updated last year
- R interface to 'Gos'☆38Updated 2 years ago
- babette is an R package to work with BEAST2☆45Updated 2 weeks ago
- An Amazing Shiny App☆17Updated 3 years ago
- ☆19Updated last year
- Easy to define segments in y-axis for 'ggplot2'.☆28Updated 5 years ago
- This repo contains the code for a shiny app that allows for visualization of subset phylogenetic trees☆15Updated 6 years ago
- Materials for the STAMPS 2019 course at the MBL in Woods Hole, MA, USA☆35Updated 5 years ago
- Analysis of Phylogenetics and Evolution☆64Updated last month
- An automated pipeline for retrieving orthologous DNA sequences from GenBank in R☆23Updated 7 months ago
- An interactive web application for demonstrating and using phyloseq.☆60Updated 5 years ago
- 🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction☆69Updated 9 months ago
- gcplyr is an R package that facilitates wrangling and analysis of microbial growth curve data☆30Updated 2 weeks ago
- Talk to the NCBI EUtils☆22Updated 4 years ago
- An R-based approach for preprocessing and aligning 16S, metagenomic, and metatranscriptomic data (PathoScope version 3.0)☆16Updated last month
- scatter pie plot☆62Updated 2 months ago
- Linear Decomposition Model☆24Updated last year
- STAMPS 2018 course☆16Updated 6 years ago
- Analysis with Profile Hidden Markov Models☆22Updated 7 months ago
- A comprehensive and customizable R package for microbiome analysis.☆21Updated 2 years ago
- fastqcr: Quality Control of Sequencing Data☆70Updated last year
- Meta package for processing and visualizing tree with data☆27Updated 3 years ago
- a take on ordination plots using ggplot2☆63Updated 7 months ago
- User-Friendly R Package for Supervised Machine Learning Pipelines☆56Updated last week
- Species richness with high diversity☆68Updated last year
- Htmlwidgets binding R commands to the BioCircos.js library☆37Updated 5 years ago
- initial commit☆26Updated 2 years ago