caijun / res4fluLinks
Resources for Influenza Research
☆23Updated 3 years ago
Alternatives and similar repositories for res4flu
Users that are interested in res4flu are comparing it to the libraries listed below
Sorting:
- Analysis of EBOV genome sequence from Guinea, Sierra Leone and Liberia from 2014-2016☆60Updated 7 years ago
- Molecular Epidemiology of Viruses in R☆19Updated 10 years ago
- An R package with over 50 highly cited, read-to-use, up-to-date COVID-19 pandemic data resources☆59Updated 3 years ago
- Create Muller Plots of Evolutionary Dynamics☆66Updated last year
- R package to access the genomics and epidemiology data and Research Library metadata compiled and standardized on outbreak.info.☆21Updated 2 years ago
- Analysis of global migration patterns of seasonal influenza viruses☆22Updated 6 years ago
- Disease outbreak reconstruction from epidemiological and genetic data☆34Updated last year
- Code and supplemental material for Statistical Thinking from Scratch☆62Updated 4 years ago
- Pathogen evolution, selection and immunity☆45Updated last year
- a take on ordination plots using ggplot2☆65Updated last year
- ☆52Updated 4 months ago
- Tools for Working with Taxonomic SQL Databases☆33Updated last month
- Web application for enormous biological heatmaps☆66Updated 5 years ago
- Teaching material for Summer Institute in Statistics for Big Data Module 1.☆65Updated 4 months ago
- Materials for Module 3 of the SISBID Workshop, Reproducible Research☆63Updated 8 years ago
- ☆54Updated 4 months ago
- Inference framework for serological data☆19Updated 3 months ago
- Compute various quantitative genetics parameters from a Generalised Linear Mixed Model (GLMM) estimates. Especially, it yields the observ…☆16Updated 11 months ago
- A package containing several useful R-functions for reading and plotting the results of Birth-Death Skyline (BDSKY) runs in BEAST2.☆11Updated 7 years ago
- Basic Tools for the Analysis of Disease Outbreaks☆12Updated 6 years ago
- Utilities and distributions for (birth-death) skyline models.☆10Updated 6 years ago
- Lecture notes for Eric Anderson and Matthew Stephens SISG course on MCMC for Statistical Genetics☆31Updated 4 years ago
- phylogenetic networks using ggplot2 and ggtree☆11Updated last month
- ☆19Updated last month
- An R HTMLWidget for making interactive manhattan plots for GWAS.☆20Updated 10 years ago
- Estimate growth rate advantage of SARS-CoV2 variants of concern based on international genomic surveillance data and multinomial spline f…☆25Updated 2 years ago
- Statistical Computing - source Rmarkdown files☆25Updated 2 years ago
- slurmR: A Lightweight Wrapper for Slurm☆60Updated last year
- Materials for Module 2 of the SISBID Workshop, Visualization of Biomedical Big Data☆26Updated 8 years ago
- R/Shiny application for viewing microbial community data☆19Updated 5 years ago