Repo for PrimerSchemes
☆22Oct 27, 2026Updated this week
Alternatives and similar repositories for primerschemes
Users that are interested in primerschemes are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- SARs-CoV-2 Primer schemes☆16May 14, 2025Updated last year
- Bacterial surveillance pipeline.☆30Sep 30, 2026Updated last month
- Olivar: towards automated variant aware primer design for multiplex tiled amplicon sequencing of pathogens☆42Apr 6, 2026Updated 6 months ago
- NCBI Pathogen Detection Portal toolkit☆11Sep 6, 2023Updated 3 years ago
- An open-source pathogen sequence database dedicated to equitable sharing, transparent governance, & empowering global public health.☆59Updated this week
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Scripts and reference files to type Group A Streptococcus☆11Aug 31, 2026Updated last month
- Nextstrain build for avian influenza viruses☆29Oct 15, 2026Updated 2 weeks ago
- ☆13Updated this week
- ☆22Jun 1, 2026Updated 4 months ago
- A Nextflow pipeline for viral genomics (Influenza/RSV) supporting Illumina and Nanopore sequencing of clinical and wastewater samples.☆10Jun 9, 2026Updated 4 months ago
- Primer schemes for real-time genome epidemiology☆32Jun 14, 2023Updated 3 years ago
- JUNIPER: Large-Scale Outbreak Reconstruction☆14Mar 26, 2025Updated last year
- Viral (meta)-genome assembly pipeline.☆24Sep 8, 2026Updated last month
- Ampseer examines reads in fastq format and identifies which multiplex PCR primer set was used to generate the SARS-CoV-2 sequencing libra…☆15Feb 27, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- VarSkip multiplex PCR designs for SARS-CoV-2 sequencing☆15Oct 9, 2026Updated 3 weeks ago
- emm Automatic Isolate Labeller☆16Mar 25, 2025Updated last year
- Bioinformatics workflows for genomic characterization, submission preparation, and genomic epidemiology of pathogens of public health con…☆71Updated this week
- INSaFLU-TELEVIR: an free web-based (but also locally installable) bioinformatics suite for virus metagenomic detection and routine genomi…☆44Oct 7, 2026Updated 3 weeks ago
- Depth-weighted De-Mixing☆134Updated this week
- app to collapse Pango lineages for reporting☆14Oct 2, 2026Updated 3 weeks ago
- 🧬 💻 TOSTADAS → Toolkit for Open Sequence Triage, Annotation and DAtabase Submission☆29Oct 20, 2026Updated last week
- PCR primer scheme definitions☆12Sep 8, 2026Updated last month
- A tool in order to accurately remove primer sequences from NGS reads in an amplicon experiment☆20Nov 12, 2025Updated 11 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Influenza genome analysis Nextflow workflow☆33Sep 15, 2025Updated last year
- The ARTIC fieldbioinformatics pipeline☆136Aug 26, 2026Updated 2 months ago
- Portable WDL workflows for CZ ID production pipelines☆53Apr 23, 2026Updated 6 months ago
- This software implements a high-throughput data processing pipeline to identify and charaterize SARS-CoV-2 variant sequences in specimens…☆11Aug 1, 2023Updated 3 years ago
- Quasitools is a collection of tools for analysing viral quasispecies data.☆27Nov 25, 2021Updated 4 years ago
- ☆25Jun 25, 2024Updated 2 years ago
- Pipeline for creating comprehensive viral reference sets.☆12Sep 17, 2026Updated last month
- A Nextflow Pipeline for Analysis of NGS-based HIV Drug Resistance Data☆12Mar 2, 2025Updated last year
- Datasets for https://github.com/nextstrain/nextclade☆47Updated this week
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Structured knowledge base of HIV-1/HIV-2.