☆13Nov 1, 2022Updated 3 years ago
Alternatives and similar repositories for subsampler
Users that are interested in subsampler are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆21Apr 2, 2025Updated last year
- baltic - backronymed adaptable lightweight tree import code for molecular phylogeny manipulation, analysis and visualisation. Development…☆124Jun 19, 2026Updated 2 weeks ago
- This project holds a line-list data (including mobility and exposure history, as well as epidemiological Timelines) of 10,000+ COVID-19 c…☆14Apr 28, 2023Updated 3 years ago
- ☆10Dec 20, 2022Updated 3 years ago
- A human mobility flow-augmented stochastic SEIR-style epidemic modeling framework is developed, which combines with data assimilation and…☆15Mar 10, 2023Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Posterior Analysis of Coalescent Trees☆14Aug 6, 2015Updated 10 years ago
- Inferring spatiotemporal dynamics of H5N1 influenza from sequence data☆10Sep 6, 2013Updated 12 years ago
- A Nextflow pipeline for viral genomics (Influenza/RSV) supporting Illumina and Nanopore sequencing of clinical and wastewater samples.☆10Jun 9, 2026Updated 3 weeks ago
- List of all the neighbors for all the countries in the world☆12Apr 3, 2019Updated 7 years ago
- Criando API Rest com Cloud Functions☆12Apr 16, 2024Updated 2 years ago
- Urban Dynamics Through the Lens of Human Mobility☆17Jun 3, 2023Updated 3 years ago
- Modelling transmission dynamics of COVID-19, while accounting for presymptomatic infectiousness, time-varying ascertainment rates, transm…☆22Jul 18, 2020Updated 5 years ago
- Script que verifica se os arquivos .bib estão seguindo as regras das referências conforme o template LaTeX do PPGCC/PUCRS.☆17Oct 18, 2021Updated 4 years ago
- R package to generate the same BEAST2 XML parameter files as generated by BEAUti 2☆13Dec 8, 2025Updated 6 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆13Jun 25, 2026Updated last week
- Code for: The effect of human mobility and control measures on the COVID-19 epidemic in China☆22Dec 1, 2022Updated 3 years ago
- A pipeline that ingests SARS-CoV-2 (i.e. nCoV) data from GISAID and Genbank, transforms it, stores it on S3, and triggers Nextstrain nCoV…☆37Updated this week
- Public data from the Glazy database☆15May 31, 2026Updated last month
- Code for simulating the metapopulation SEIR model. Sample network for US national simulation included.☆26Sep 3, 2025Updated 10 months ago
- Software for the Tree-Based Scan Statistic☆17Jun 17, 2026Updated 2 weeks ago
- SARs-CoV-2 Primer schemes☆16May 14, 2025Updated last year
- Repo for PrimerSchemes☆17Updated this week
- A library of MATLAB functions for visualization, processing, and analysis of output from Bayesian models fit with Stan.☆10Dec 17, 2021Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Maximum likelihood inference of time stamped phylogenies and ancestral reconstruction☆253Jun 16, 2026Updated 2 weeks ago
- 🧬 💻 TOSTADAS → Toolkit for Open Sequence Triage, Annotation and DAtabase Submission☆29Mar 10, 2026Updated 3 months ago
- Main development repository for SpreadGL☆22Jun 18, 2026Updated 2 weeks ago
- The R package 'phylosamp' implements novel tools that estimate the probability of transmission between two cases given phylogenetic linka…☆13May 23, 2023Updated 3 years ago
- ☆13Mar 18, 2022Updated 4 years ago
- A package containing several useful R-functions for reading and plotting the results of Birth-Death Skyline (BDSKY) runs in BEAST2.☆12Nov 28, 2018Updated 7 years ago
- Stitch together Nanopore tiled amplicon data without polishing a reference☆18Jan 29, 2024Updated 2 years ago
- Notes for a workshop on using git and github☆10Dec 13, 2019Updated 6 years ago
- Basic Epidemic, Activity, and Response COVID-19 model☆31Jul 6, 2020Updated 5 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- ☆25Jun 25, 2024Updated 2 years ago
- Guidelines and forecasts for a collaborative U.S. influenza forecasting project.☆39May 4, 2020Updated 6 years ago
- Toolkit for manipulating FASTA and SAM files☆23Mar 14, 2024Updated 2 years ago
- ☆22Jun 1, 2026Updated last month
- For all your cluster needs☆18Feb 3, 2023Updated 3 years ago
- emm Automatic Isolate Labeller☆14Mar 25, 2025Updated last year
- LinguaPhylo: A language for describing, visualising and simulating probabilistic phylogenetic models☆21Jun 17, 2026Updated 2 weeks ago