several scripts for bioinformatics
☆25Nov 27, 2025Updated 7 months ago
Alternatives and similar repositories for bioscripts
Users that are interested in bioscripts are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Some components that speed up and reduce resource cost for original ALLHiC☆15Jun 21, 2025Updated last year
- T2Tools is a toolset contains several tools for T2T assembly, and it is under development.☆17Sep 17, 2025Updated 9 months ago
- CATG (Collinearity-based Assembly correcTor GUI) is a tool that can correct genome assembly with collinearity and generate tour files for…☆18Jan 24, 2026Updated 5 months ago
- A plot package for bioinformatics☆29Jan 24, 2026Updated 5 months ago
- QuickProt: A Fast and Accurate Homology-Based Protein Annotation Tool for Non-Model Organisms to Advance Comparative Genomics☆23May 16, 2026Updated last month
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- AlleleFinder is a tool for identifying allele genes from polyploid genome.☆41May 29, 2026Updated last month
- Pipeline for genome scaffolding by modelling distributions of HiC pairs☆11Dec 7, 2022Updated 3 years ago
- A filter algorithm with program to filter an alignment or mapping file☆12May 15, 2025Updated last year
- C-Phasing/CPhasing: Phasing and scaffolding polyploid genomes based on 3C-based data (Pore-C, CiFi, Hi-C, Omni-C).☆100May 7, 2026Updated last month
- Haplotype aware de novo assembly of diploid genome from long reads☆54Mar 16, 2022Updated 4 years ago
- Scripts to do haplotype analysis on pan genomes.☆20Sep 24, 2020Updated 5 years ago
- Whole Genome Annotation Pipeline☆16Jun 20, 2025Updated last year
- ☆35Updated this week
- ☆18Apr 28, 2026Updated 2 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- HiC-Hiker: A probabilistic model to determine contig orientation in chromosome-length scaffolds with Hi-C☆26Jan 14, 2021Updated 5 years ago
- ☆16May 7, 2023Updated 3 years ago
- Multi-level visualization of genomic statistical variables on rectangular chromosomes☆46May 23, 2026Updated last month
- ☆16Apr 3, 2023Updated 3 years ago
- Draw a dot plot from a paf alignment☆44May 9, 2026Updated last month
- Cool Bioinformatics Scripts☆12May 21, 2024Updated 2 years ago
- Tools for working with agp files☆19Jun 26, 2025Updated last year
- FreeHi-C pipeline for high fidelity Hi-C data simulation.☆12Jul 13, 2021Updated 4 years ago
- Homologizer: phasing gene copies into polyploid subgenomes☆13Feb 3, 2026Updated 4 months ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ☆17Mar 2, 2024Updated 2 years ago
- Repository☆10Oct 23, 2024Updated last year
- ☆29Jul 16, 2022Updated 3 years ago
- Code associated with the manuscript "A complete reference genome improves analysis of human genetic variation".☆17Jan 17, 2023Updated 3 years ago
- A genome assembly assessment pipeline.☆38Jun 5, 2026Updated 3 weeks ago
- Code repository for the Global Ant Genomics Alliance☆18Jun 16, 2025Updated last year
- A personal pipeline to calculate Ka,Ks and Ka/Ks using PAML-yn00 with YN method☆10Feb 26, 2025Updated last year
- ☆32Jan 3, 2025Updated last year
- A collection of scripts for working with Hi-C data, Juicebox, and other genomic file formats☆69May 22, 2021Updated 5 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A pipeline for assemble chroloplast genome using short/long reads☆11Mar 31, 2022Updated 4 years ago
- WinPCA. A package for windowed principal component analysis.☆53Jun 9, 2026Updated 3 weeks ago
- ☆10Jun 13, 2020Updated 6 years ago
- To phase, partition and visualize subgenomes of a neoallopolyploid or hybrid based on the subgenome-specific repetitive kmers.☆74Jun 4, 2026Updated 3 weeks ago
- Finding patch of conserved amino acid sites in 3D structure☆14Apr 13, 2025Updated last year
- bioinfo workflow based on snakemake☆15Feb 22, 2024Updated 2 years ago
- ggideogram is a ggplot2 extension package for drawing chromosome diagrams☆18Nov 29, 2024Updated last year