sc-zhang / bioscriptsLinks
several scripts for bioinformatics
☆24Updated 2 weeks ago
Alternatives and similar repositories for bioscripts
Users that are interested in bioscripts are comparing it to the libraries listed below
Sorting:
- Code for Article "A pan-genome of 69 Arabidopsis thaliana accessions reveals a conserved genome structure throughout the global species r…☆23Updated last year
- “When everything is connected to everything else, for better or worse, everything matters.” Bruce Mau☆19Updated 5 years ago
- Construct and Analyze the North American Vitis pangenome☆26Updated 3 months ago
- This is used to achieve haplotype-resolved assembly of tetraploid genomes using gamete sequencings☆12Updated 4 years ago
- A comprehensive pipeline for RNAseq data analysis☆22Updated last year
- ☆25Updated 2 years ago
- A pipeline for identifying conserved topologically associating domain boundaries among multiple species.☆16Updated 5 months ago
- ☆16Updated 6 years ago
- Yet another Hi-C scaffolding tool☆22Updated last year
- Cantù Lab @ UC Davis - Annotation pipeline - EVM based☆14Updated last year
- ☆29Updated 2 years ago
- ☆16Updated 3 years ago
- An effective alignment tool for long noisy 3C data (e.g. Pore-C and C-walk)☆14Updated last year
- A genome annotation pipeline that use short and long sequencing reads alignments from animal genomes☆30Updated last year
- A method for measuring chromosome-specific telomere length from long reads☆22Updated last year
- Identification of conserved non-coding sequences in plants☆30Updated 2 months ago
- The tools are used for displaying hic signal of genome☆24Updated 4 years ago
- Whole Genome Annotation Pipeline☆16Updated 5 months ago
- ExOrthist: a pipeline to extract exon orthologies at any evolutionary distance.☆25Updated last year
- Scripts that used in our chicken T2T manuscript.☆22Updated 2 years ago
- The code used in the manuscript titled "Gene duplication and evolution in recurring polyploidization-diploidization cycles in plants".☆29Updated 4 years ago
- ☆29Updated 3 years ago
- conserved non-coding sequence☆16Updated 3 years ago
- scripts for the project of seven thaliana genomes assembly☆42Updated 4 years ago
- Convert RepeatMasker ".out" file into a gff3 with colors!!!☆23Updated 5 years ago
- ☆14Updated 3 years ago
- Methods and recipes for Plant Genome Annotation - Transposable Elements☆20Updated 6 months ago
- B73Ab10 genome assembly methods☆17Updated 3 years ago
- HiC-Hiker: A probabilistic model to determine contig orientation in chromosome-length scaffolds with Hi-C☆26Updated 4 years ago
- CATG (Collinearity-based Assembly correcTor GUI) is a tool that can correct genome assembly with collinearity and generate tour files for…☆17Updated 10 months ago