several scripts for bioinformatics
☆24Nov 27, 2025Updated 4 months ago
Alternatives and similar repositories for bioscripts
Users that are interested in bioscripts are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Some components that speed up and reduce resource cost for original ALLHiC☆14Jun 21, 2025Updated 9 months ago
- T2Tools is a toolset contains several tools for T2T assembly, and it is under development.☆15Sep 17, 2025Updated 6 months ago
- CATG (Collinearity-based Assembly correcTor GUI) is a tool that can correct genome assembly with collinearity and generate tour files for…☆17Jan 24, 2026Updated 2 months ago
- A plot package for bioinformatics☆28Jan 24, 2026Updated 2 months ago
- QuickProt: A Fast and Accurate Homology-Based Protein Annotation Tool for Non-Model Organisms to Advance Comparative Genomics☆18Jan 12, 2026Updated 2 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- AlleleFinder is a tool for identifying allele genes from polyploid genome.☆36Dec 21, 2025Updated 3 months ago
- A filter algorithm with program to filter an alignment or mapping file☆12May 15, 2025Updated 10 months ago
- C-Phasing/CPhasing: Phasing and scaffolding polyploid genomes based on 3C-based data (Pore-C, CiFi, Hi-C，Omni-C).☆90Jan 25, 2026Updated 2 months ago
- Haplotype aware de novo assembly of diploid genome from long reads☆54Mar 16, 2022Updated 4 years ago
- Scripts to do haplotype analysis on pan genomes.☆20Sep 24, 2020Updated 5 years ago
- Whole Genome Annotation Pipeline☆16Jun 20, 2025Updated 9 months ago
- ☆33Mar 19, 2025Updated last year
- ☆18Jan 14, 2026Updated 2 months ago
- HiC-Hiker: A probabilistic model to determine contig orientation in chromosome-length scaffolds with Hi-C☆26Jan 14, 2021Updated 5 years ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆16May 7, 2023Updated 2 years ago
- Multi-level visualization of genomic statistical variables on rectangular chromosomes☆46Mar 13, 2026Updated 3 weeks ago
- Draw a dot plot from a paf alignment☆40Sep 18, 2025Updated 6 months ago
- ☆16Apr 3, 2023Updated 3 years ago
- Cool Bioinformatics Scripts☆12May 21, 2024Updated last year
- Tools for working with agp files☆19Jun 26, 2025Updated 9 months ago
- FreeHi-C pipeline for high fidelity Hi-C data simulation.☆12Jul 13, 2021Updated 4 years ago
- Homologizer: phasing gene copies into polyploid subgenomes☆11Feb 3, 2026Updated 2 months ago
- ☆17Mar 2, 2024Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Repository☆10Oct 23, 2024Updated last year
- ☆29Jul 16, 2022Updated 3 years ago
- Code associated with the manuscript "A complete reference genome improves analysis of human genetic variation".☆17Jan 17, 2023Updated 3 years ago
- Code repository for the Global Ant Genomics Alliance☆17Jun 16, 2025Updated 9 months ago
- A genome assembly assessment pipeline.☆38Nov 20, 2023Updated 2 years ago
- A personal pipeline to calculate Ka,Ks and Ka/Ks using PAML-yn00 with YN method☆10Feb 26, 2025Updated last year
- ☆32Jan 3, 2025Updated last year
- A collection of scripts for working with Hi-C data, Juicebox, and other genomic file formats☆69May 22, 2021Updated 4 years ago
- WinPCA. A package for windowed principal component analysis.☆48Apr 2, 2026Updated last week
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- A pipeline for assemble chroloplast genome using short/long reads☆10Mar 31, 2022Updated 4 years ago
- To phase, partition and visualize subgenomes of a neoallopolyploid or hybrid based on the subgenome-specific repetitive kmers.☆70Mar 23, 2025Updated last year
- ☆10Jun 13, 2020Updated 5 years ago
- Finding patch of conserved amino acid sites in 3D structure☆14Apr 13, 2025Updated 11 months ago
- ggideogram is a ggplot2 extension package for drawing chromosome diagrams☆17Nov 29, 2024Updated last year
- bioinfo workflow based on snakemake☆14Feb 22, 2024Updated 2 years ago
- Dynamic Elongation of a Genome Assembly Path☆25Feb 25, 2026Updated last month