Monoclonal Antibody GEnerator (MAGE) - a fine-tuned LLM for generating paired heavy-light antibody variable sequences with predicted binding specificity to an input antigen prompt sequence
☆77Jan 15, 2026Updated 4 months ago
Alternatives and similar repositories for MAGE_ab_generation
Users that are interested in MAGE_ab_generation are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆17Jan 5, 2024Updated 2 years ago
- Official Implementation of IgGM☆192Nov 30, 2025Updated 5 months ago
- ☆12Nov 16, 2023Updated 2 years ago
- Fold Conditioned protein design pipeline based on AF2Multimer Hallucination☆52Mar 25, 2026Updated 2 months ago
- Pretrainable geometric graph neural network for antibody affinity maturation☆77Mar 18, 2025Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A python tool for numerically encoding protein sequences based on PSSM profile☆13Jun 25, 2021Updated 4 years ago
- HalluDesign, a hallucination-driven all-atom framework for the iterative co-optimization and co-design of protein sequences and structure…☆78Updated this week
- de novo design of high affinity biological binders☆165Apr 30, 2026Updated 3 weeks ago
- Useful functions for manipulating Multiplex Assay of Variant Effect datasets.☆10Feb 6, 2025Updated last year
- open source code for Tencent tFold☆156Mar 14, 2025Updated last year
- FTDMP is a software system for running docking experiments and scoring/ranking multimeric models.☆13Apr 30, 2026Updated 3 weeks ago
- ☆20Nov 21, 2025Updated 6 months ago
- Cryo-EM data viewer in napari☆14Dec 1, 2020Updated 5 years ago
- An R package to implement Differential Gene Set Enrichment Analysis (DGSEA): A statistical approach to quantify the relative enrichment o…☆15Apr 12, 2023Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Deploying synthetic coevolution and machine learning to engineer protein-protein interactions☆17Jul 30, 2023Updated 2 years ago
- A conditionally adapted protein language model for the generation of enzymes☆24Nov 26, 2024Updated last year
- Codebase for Germinal, a broadly enabling generative pipeline for efficient generation of epitope-targeted de novo antibodies.☆210Apr 24, 2026Updated last month
- NeuralPLexer: State-specific protein-ligand complex structure prediction with a multi-scale deep generative model☆329Oct 6, 2025Updated 7 months ago
- ☆11Sep 20, 2021Updated 4 years ago
- The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…☆31Jul 8, 2024Updated last year
- A comprehensive tool to infer TF-centred, spatial gene regulatory networks for the spatially resolved transcriptomic data.☆21Apr 27, 2025Updated last year
- Scripts to add mmseqs MSA/templates to alphafold3 input json and also custom template files☆20Dec 4, 2024Updated last year
- PLM based active learning model for protein engineering☆86Aug 6, 2024Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Cryo-EM micrograph segmentation through deep learning☆22Oct 10, 2025Updated 7 months ago
- R package that performs sparse factor analysis and differential gene expression discovery simultaneously on single-cell CRISPR screening …☆25Oct 3, 2023Updated 2 years ago
- Frankies Scalable, AI-Based Antibody Design Pipeline☆19Feb 20, 2026Updated 3 months ago
- ☆41Jan 21, 2026Updated 4 months ago
- ☆43Apr 12, 2024Updated 2 years ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Oct 25, 2024Updated last year
- ☆24Jan 9, 2025Updated last year
- ResPRE is an algorithm for protein residue-residue contact-map prediction☆21May 20, 2019Updated 7 years ago
- ☆494Mar 5, 2026Updated 2 months ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- A visualization software for antibody multi sequence alignment☆22Jun 15, 2024Updated last year
- ☆50Sep 4, 2025Updated 8 months ago
- SableBind is an open-source framework dedicated to predicting protein-ligand binding affinity☆13Feb 6, 2025Updated last year
- ☆26Dec 25, 2023Updated 2 years ago
- ☆119Jan 3, 2026Updated 4 months ago
- Step-by-step guide to install and configure AlphaFold 3 using a Conda Python 3.11 environment. No system-wide installations required. ✅ …☆49May 14, 2026Updated last week
- ☆33Feb 5, 2025Updated last year