Monoclonal Antibody GEnerator (MAGE) - a fine-tuned LLM for generating paired heavy-light antibody variable sequences with predicted binding specificity to an input antigen prompt sequence
☆78Jan 15, 2026Updated 5 months ago
Alternatives and similar repositories for MAGE_ab_generation
Users that are interested in MAGE_ab_generation are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆17Jan 5, 2024Updated 2 years ago
- Official Implementation of IgGM☆201May 28, 2026Updated last month
- ☆12Nov 16, 2023Updated 2 years ago
- Fold Conditioned protein design pipeline based on AF2Multimer Hallucination☆54Jun 22, 2026Updated 2 weeks ago
- mBER - Manifold Binder Engineering and Refinement. mBER enables antibody binder design by leveraging structure templates and sequence con…☆138Apr 27, 2026Updated 2 months ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Pretrainable geometric graph neural network for antibody affinity maturation☆79Mar 18, 2025Updated last year
- A python tool for numerically encoding protein sequences based on PSSM profile☆12Jun 25, 2021Updated 5 years ago
- HalluDesign, a hallucination-driven all-atom framework for the iterative co-optimization and co-design of protein sequences and structure…☆83Jun 15, 2026Updated 3 weeks ago
- open source code for Tencent tFold☆160Mar 14, 2025Updated last year
- Useful functions for manipulating Multiplex Assay of Variant Effect datasets.☆11Feb 6, 2025Updated last year
- Code for humanization of antibody and nanobody☆88Aug 28, 2025Updated 10 months ago
- FTDMP is a software system for running docking experiments and scoring/ranking multimeric models.☆13May 31, 2026Updated last month
- ☆20Nov 21, 2025Updated 7 months ago
- Cryo-EM data viewer in napari☆14Dec 1, 2020Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- An R package to implement Differential Gene Set Enrichment Analysis (DGSEA): A statistical approach to quantify the relative enrichment o…☆15Apr 12, 2023Updated 3 years ago
- Deploying synthetic coevolution and machine learning to engineer protein-protein interactions☆17Jul 30, 2023Updated 2 years ago
- A conditionally adapted protein language model for the generation of enzymes☆24Nov 26, 2024Updated last year
- Codebase for Germinal, a broadly enabling generative pipeline for efficient generation of epitope-targeted de novo antibodies.☆250Apr 24, 2026Updated 2 months ago
- NeuralPLexer: State-specific protein-ligand complex structure prediction with a multi-scale deep generative model☆331Oct 6, 2025Updated 8 months ago
- ☆11Sep 20, 2021Updated 4 years ago
- A structure checker in python☆26Nov 25, 2024Updated last year
- The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…☆31Jul 8, 2024Updated last year
- A comprehensive tool to infer TF-centred, spatial gene regulatory networks for the spatially resolved transcriptomic data.☆22Apr 27, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Scripts to add mmseqs MSA/templates to alphafold3 input json and also custom template files☆22Dec 4, 2024Updated last year
- PLM based active learning model for protein engineering☆86Aug 6, 2024Updated last year
- Cryo-EM micrograph segmentation through deep learning☆23Oct 10, 2025Updated 8 months ago
- R package that performs sparse factor analysis and differential gene expression discovery simultaneously on single-cell CRISPR screening …☆25Oct 3, 2023Updated 2 years ago
- Frankies Scalable, AI-Based Antibody Design Pipeline☆18Feb 20, 2026Updated 4 months ago
- ☆41Jan 21, 2026Updated 5 months ago
- ☆43Apr 12, 2024Updated 2 years ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Oct 25, 2024Updated last year
- Aligning protein generative models with experimental fitness☆124Mar 12, 2026Updated 3 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆24Jan 9, 2025Updated last year
- ResPRE is an algorithm for protein residue-residue contact-map prediction☆21May 20, 2019Updated 7 years ago
- ☆508Mar 5, 2026Updated 4 months ago
- A visualization software for antibody multi sequence alignment☆22Jun 15, 2024Updated 2 years ago
- ☆52Sep 4, 2025Updated 10 months ago
- SableBind is an open-source framework dedicated to predicting protein-ligand binding affinity☆13Feb 6, 2025Updated last year
- ☆27Dec 25, 2023Updated 2 years ago