☆49Sep 17, 2024Updated 2 years ago
Alternatives and similar repositories for SPLASH
Users that are interested in SPLASH are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆97Jul 7, 2026Updated 3 months ago
- Variant Calling for the HPRC2☆19May 26, 2026Updated 4 months ago
- conserved non-coding sequence☆18Feb 21, 2022Updated 4 years ago
- Genotyping of paralog specific gene types☆22Aug 28, 2026Updated last month
- HaploSweep is a method for detecting and categorizing soft and hard selective sweeps based on haplotype structure.☆11Sep 24, 2024Updated 2 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆17Mar 17, 2023Updated 3 years ago
- Snakemake workflow for somatic mutation detection without matched normal samples☆14Mar 4, 2023Updated 3 years ago
- ☆12Aug 3, 2025Updated last year
- ☆12Nov 23, 2020Updated 5 years ago
- Bash scripts and data used in pantranscriptomic paper☆25Oct 21, 2022Updated 3 years ago
- ☆15May 3, 2023Updated 3 years ago
- ☆18Apr 26, 2026Updated 5 months ago
- Code for "Improving Stain Invariance of CNNs for Segmentation by Fusing Channel Attention and Domain-Adversarial Training"☆10Dec 5, 2023Updated 2 years ago
- ☆32May 7, 2026Updated 5 months ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- pangenome alignment, implicit/explicit graph, and variants for human pangenome project release 2☆24Sep 9, 2026Updated last month
- tandemtwister: Tandem repeat genotyping tool☆23Feb 1, 2026Updated 8 months ago
- 🧪 Optimized protocol for m6A-SAC-seq☆13Jun 16, 2025Updated last year
- ☆15Jun 3, 2022Updated 4 years ago
- PanPA is a tool for building panproteome graphs and aligning sequences back to the graphs.☆19Apr 9, 2026Updated 6 months ago
- Code for assembly approach presented in "Haplotype-resolved assembly of a tetraploid potato genome using long reads and low-depth offspri…☆15Nov 20, 2023Updated 2 years ago
- Targeted genotyper for complex polymorphic genes☆50Oct 2, 2026Updated last week
- ☆11Aug 2, 2024Updated 2 years ago
- protocols for bioinformatics data analysis☆10Sep 22, 2020Updated 6 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Read and write VCF and BCF files☆14Oct 16, 2025Updated 11 months ago
- ☆10Jan 27, 2025Updated last year
- Pangenome-based genome inference☆181Sep 15, 2026Updated 3 weeks ago
- Code used to process and analyze structural variants and short tandem repeat variants profiled in 719 deeply sequenced whole genomes as p…☆11Jun 25, 2019Updated 7 years ago
- Tools for haplotype-wise reconstruction of pseudomolecules☆23Jul 29, 2026Updated 2 months ago
- Transfer HiFi read mappings from their own assembly contigs to a standard reference☆40Dec 30, 2025Updated 9 months ago
- rnalib: a python-based transcriptomics library☆14Jul 27, 2026Updated 2 months ago
- ☆102Apr 22, 2024Updated 2 years ago
- This is a tool for speculation of ancestral allel, calculation of sfs and drawing its bar plot. It is easy-to-use and runing fast. What y…☆11Dec 16, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- This is a method to find telomeres and centromeres in plants.☆43Jun 17, 2023Updated 3 years ago
- ☆31Mar 27, 2024Updated 2 years ago
- Differential k-mer analysis☆42Jan 29, 2024Updated 2 years ago
- Eukaryote Genome Annotation☆26Aug 21, 2026Updated last month
- This tutorial is a guide to perform TWAS with the data used in Torres‐Rodríguez, J. Vladimir, et al. "Population‐level gene expression ca…☆27Feb 23, 2026Updated 7 months ago
- a software for annotating plant genes☆24Dec 22, 2023Updated 2 years ago
- Detecting Archaic Introgression from Population Genetic Data with S*☆10Aug 9, 2026Updated 2 months ago