☆46Sep 17, 2024Updated last year
Alternatives and similar repositories for SPLASH
Users that are interested in SPLASH are comparing it to the libraries listed below
Sorting:
- ☆84Sep 4, 2025Updated 6 months ago
- conserved non-coding sequence☆16Feb 21, 2022Updated 4 years ago
- ☆16Mar 17, 2023Updated 3 years ago
- HaploSweep is a method for detecting and categorizing soft and hard selective sweeps based on haplotype structure.☆11Sep 24, 2024Updated last year
- ☆12Aug 3, 2025Updated 7 months ago
- Bash scripts and data used in pantranscriptomic paper☆24Oct 21, 2022Updated 3 years ago
- ☆12Nov 23, 2020Updated 5 years ago
- ☆14Jun 3, 2022Updated 3 years ago
- Genotyping of copy number sensitive allele-specific haplotypes☆27Nov 6, 2025Updated 4 months ago
- 🧪 Optimized protocol for m6A-SAC-seq☆12Jun 16, 2025Updated 9 months ago
- Targeted genotyper for complex polymorphic genes☆38Feb 27, 2026Updated 3 weeks ago
- Snakemake workflow for somatic mutation detection without matched normal samples☆13Mar 4, 2023Updated 3 years ago
- PanPA is a tool for building panproteome graphs and aligning sequences back to the graphs.☆18Feb 26, 2026Updated 3 weeks ago
- ☆32Dec 3, 2021Updated 4 years ago
- Code for assembly approach presented in "Haplotype-resolved assembly of a tetraploid potato genome using long reads and low-depth offspri…☆14Nov 20, 2023Updated 2 years ago
- Nascent Transcription Processing Pipeline☆22Nov 20, 2025Updated 4 months ago
- Code used to process and analyze structural variants and short tandem repeat variants profiled in 719 deeply sequenced whole genomes as p…☆11Jun 25, 2019Updated 6 years ago
- Read and write VCF and BCF files☆14Oct 16, 2025Updated 5 months ago
- ☆10Jan 27, 2025Updated last year
- ☆24Dec 3, 2025Updated 3 months ago
- Construct and Analyze the North American Vitis pangenome☆29Aug 19, 2025Updated 7 months ago
- ☆21Feb 5, 2026Updated last month
- Tools for haplotype-wise reconstruction of pseudomolecules☆22Sep 5, 2025Updated 6 months ago
- ☆102Apr 22, 2024Updated last year
- Pangenome-based genome inference☆162Dec 1, 2025Updated 3 months ago
- This is a tool for speculation of ancestral allel, calculation of sfs and drawing its bar plot. It is easy-to-use and runing fast. What y…☆11Dec 16, 2022Updated 3 years ago
- A package with ASCII art of Star Wars☆10Aug 15, 2020Updated 5 years ago
- ☆29Mar 27, 2024Updated last year
- Pairwise whole genome aligner☆232Mar 2, 2026Updated 2 weeks ago
- a Semi-automated pipeline for assembling T2T genome☆25Oct 16, 2025Updated 5 months ago
- This is a method to find telomeres and centromeres in plants.☆42Jun 17, 2023Updated 2 years ago
- Differential k-mer analysis☆40Jan 29, 2024Updated 2 years ago
- a software for annotating plant genes☆23Dec 22, 2023Updated 2 years ago
- ☆11Aug 2, 2024Updated last year
- convert PAF format to CHAIN format☆34May 14, 2025Updated 10 months ago
- ☆41Feb 15, 2026Updated last month
- TQSLE v1.0 released☆10Aug 29, 2023Updated 2 years ago
- Constructing a pangenome gene graph☆205Aug 11, 2025Updated 7 months ago
- ☆67Apr 9, 2024Updated last year