rsinghlab / scNODE
scNODE: Generative Model for Temporal Single Cell Transcriptomic Data Prediction
☆18Updated 4 months ago
Alternatives and similar repositories for scNODE:
Users that are interested in scNODE are comparing it to the libraries listed below
- ☆23Updated last year
- Deciphering driver regulators of cell fate decisions from single-cell RNA-seq data☆22Updated 3 months ago
- ☆35Updated last year
- Additional code and analysis from the single-cell integration benchmarking project☆57Updated 2 years ago
- PENCIL is a novel tool for singlecell data analysis to identify phenotype associated subpopulations and informative genes simultaneously.☆28Updated last year
- ☆52Updated 6 months ago
- Enhancing spatial transcriptomics data by predicting the expression of unmeasured genes from a dissociated scRNA-seq data☆33Updated 7 months ago
- End-to-end analysis of spatial multi-omics data☆39Updated this week
- The benchmarking of spatial transcriptomics deconvolution methods☆28Updated last year
- Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets☆30Updated last year
- overview of spatial datasets☆70Updated last year
- A unified approach for integrating spatial and single-cell transcriptomics data by leveraging deep generative models☆59Updated 8 months ago
- STAligner is a tool for alignment and integration of spatially resolved transcriptomics data.☆35Updated 10 months ago
- ☆31Updated 8 months ago
- ☆45Updated 2 years ago
- Python agent-based model tool for inference, visualization and analysis of cell-cell communication from single-cell data☆25Updated last month
- ☆18Updated 6 months ago
- ☆29Updated this week
- Predict RNA velocity through deep learning☆66Updated last year
- ☆29Updated last year
- ☆41Updated last year
- ☆23Updated last month
- ☆37Updated 2 years ago
- Construction of a 3D whole organism spatial atlas by joint modeling of multiple slices☆60Updated last year
- A computational method scSemiProfiler that provides affordable single-cell data for large-scale disease cohorts using deep generative mod…☆21Updated last month
- ☆51Updated last week
- ☆39Updated last week
- ☆17Updated 3 years ago
- scPRAM accurately predicts single-cell gene expression perturbation response based on attention mechanism☆13Updated 4 months ago
- single cell foundation model for Gene network inference and more☆15Updated 5 months ago