rsinghlab / scNODE
scNODE: Generative Model for Temporal Single Cell Transcriptomic Data Prediction
☆17Updated 3 weeks ago
Related projects ⓘ
Alternatives and complementary repositories for scNODE
- ☆32Updated 9 months ago
- ☆36Updated this week
- ☆49Updated 3 months ago
- Enhancing spatial transcriptomics data by predicting the expression of unmeasured genes from a dissociated scRNA-seq data☆28Updated 4 months ago
- Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets☆32Updated last year
- Additional code and analysis from the single-cell integration benchmarking project☆54Updated last year
- PhyloVelo, Phylogeny-based transcriptomic velocity of single cells☆40Updated last year
- ☆78Updated last week
- A unified approach for integrating spatial and single-cell transcriptomics data by leveraging deep generative models☆53Updated 5 months ago
- PENCIL is a novel tool for singlecell data analysis to identify phenotype associated subpopulations and informative genes simultaneously.☆25Updated 9 months ago
- ☆22Updated last year
- ☆44Updated last year
- Collection of computational tools for cell-cell communication inference for single-cell and spatially resolved omics☆27Updated this week
- ☆28Updated last year
- overview of spatial datasets☆67Updated 8 months ago
- Predict RNA velocity through deep learning☆62Updated 10 months ago
- STAligner is a tool for alignment and integration of spatially resolved transcriptomics data.☆29Updated 7 months ago
- ☆46Updated 9 months ago
- ☆40Updated 6 months ago
- Spatial direct messaging detected by bivariate Moran☆24Updated 6 months ago
- Deciphering cell-cell communication from spatially resolved transcriptomic data at single-cell resolution with subgraph-based attentional…☆18Updated 2 months ago
- ☆20Updated 6 months ago
- Deconvoluting Spatial Transcriptomics Data through Graph-based Artificial Intelligence☆34Updated 2 years ago
- single cell foundation model for Gene network inference and more☆13Updated last month
- Deciphering driver regulators of cell fate decisions from single-cell RNA-seq data☆21Updated 2 weeks ago
- Data processing and analysis workflow for GAGE-seq, a coassay of single-cell HiC and single-cell RNA-seq☆11Updated 7 months ago
- an integrative algorithm to distinguish spatially variable cell subclusters by reconstructing cells onto a pseudo space with spatial tran…☆21Updated last year
- Single cell omics biology annotations☆48Updated last month
- End-to-end analysis of spatial multi-omics data☆35Updated 3 weeks ago
- ☆37Updated 3 weeks ago