Core-Bioinformatics / bulkAnalyseR
☆27Updated last year
Alternatives and similar repositories for bulkAnalyseR:
Users that are interested in bulkAnalyseR are comparing it to the libraries listed below
- workshop website on readthedocs☆19Updated last month
- 🧬 Gene analysis toolkit based on R☆56Updated 3 months ago
- Scripts to install as a Bioconda package for making workflows☆18Updated 6 months ago
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 3 years ago
- scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper☆24Updated 2 years ago
- An R package to analyze single-cell V(D)J data☆24Updated last year
- Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment☆20Updated last year
- R package wrapping bedtools☆39Updated 3 weeks ago
- Snakemake pipeline for running MAJIQ☆20Updated last year
- Workshop • Analysis of RNA-seq data☆35Updated last year
- Merge fastq files split over lanes☆20Updated 7 years ago
- Peak caller for CUT&TAG data☆26Updated 2 years ago
- Filtering of PDX samples for mouse derived reads☆27Updated 2 years ago
- Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data☆36Updated 3 years ago
- Harvard FAS informatics scRNAseq workshop website☆37Updated 5 years ago
- a tool for summarizing and integrating gene-set analysis results☆16Updated 8 months ago
- Robust, multivariate, multi-sample, multi-celltype QC for single cell RNA-seq data☆37Updated 2 years ago
- Toolbox with R scripts☆38Updated 6 years ago
- Snakemake pipeline for benchmarking cell-type deconvolution methods and deconvolving real bulk RNA-seq data with the use of scRNA-seq dat…☆16Updated 8 months ago
- Course Materials for Genomics Data Mining☆22Updated 2 months ago
- ☆38Updated 2 years ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated last week
- 📊 An R package of RNA-seq workflow☆16Updated 2 years ago
- CellR: single-cell RNA-Seq guided deconvolution of cellular composition from bulk-tissue RNA-Seq☆17Updated 3 years ago
- satuRn is a highly performant and scalable method for performing differential transcript usage analyses.☆22Updated 2 years ago
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆31Updated last week
- ☆40Updated 6 years ago
- ☆30Updated 2 months ago
- Docker container for genomics analyses in R.☆24Updated 11 months ago
- binned motif enrichment analysis and visualisation☆40Updated 3 weeks ago