vagarwal87 / TargetScanToolsLinks
A suite of tools for evolutionary and functional analysis of microRNA binding sites http://www.targetscan.org
☆42Updated 6 years ago
Alternatives and similar repositories for TargetScanTools
Users that are interested in TargetScanTools are comparing it to the libraries listed below
Sorting:
- ☆48Updated 3 years ago
- circular RNA quantification tools☆31Updated last year
- Integrative analysis pipeline for pooled CRISPR functional genetic screens☆30Updated last year
- direct comparison of circular and linear RNA expression☆23Updated 4 years ago
- Identifying genome-wide translated open reading frames using ribosome profiling☆23Updated 2 years ago
- Predicting gene expression levels from genomic sequences☆53Updated 5 years ago
- ☆20Updated last year
- A portable, flexible, parallelized tool for complete processing of massively parallel reporter assay data☆32Updated 6 months ago
- RAGE-seq scripts☆18Updated 3 years ago
- Regression-based annotation of protein-coding sequences from ribosome profiling data☆32Updated 4 years ago
- ☆34Updated 2 years ago
- Microbial analysis in TCGA data☆91Updated last year
- Convert Counts to Fragments per Kilobase of Transcript per Million (FPKM)☆62Updated 4 years ago
- PECA is a software for inferring context specific gene regulatory network from paired gene expression and chromatin accessibility data☆43Updated last year
- A guide to running MaxQuant in Linux☆33Updated 5 years ago
- Motif Scan and Enrichment Analysis (MoSEA)☆16Updated 4 years ago
- This is the package of Yuanfang's winning algorithm in the ENCODE-DREAM in vivo Transcription Factor Binding Site Prediction Challenge☆20Updated 5 years ago
- Transcription Factor Enrichment Analysis☆34Updated last week
- A list of alternative splicing analysis resources☆44Updated 3 months ago
- MeRIPseqPipe:An integrated analysis pipeline for MeRIP-seq data based on Nextflow.☆40Updated last year
- Estimation of Promoter Activity from RNA-Seq data☆53Updated last week
- ☆20Updated 5 years ago
- LncADeep is an ab initio lncRNA identification and functional annotation tool based on deep learning☆27Updated 7 years ago
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆41Updated 4 years ago
- Deep-learning Augmented RNA-seq analysis of Transcript Splicing☆114Updated last year
- ☆40Updated last week
- CADD scripts release for offline scoring. For more information about CADD, please visit our website☆84Updated last month
- A comprehensive tool for processing, analyzing and visulizing single cell chromatin accessibility sequencing data☆24Updated 9 months ago
- splicing and feature maps for RBPs☆25Updated 3 years ago
- a toolset for mining multi-dimensional features of the translatome with ribosome profiling data☆18Updated 6 months ago